Query= MSMg01no377_h08.b1 MSMg01no377_h08.b1 CHROMAT_FILE:
MSMg01no377_h08.b1 PHD_FILE: MSMg01no377_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:38 2005
(489 letters)
>mm_chr17_67723769_67724657
Length = 889
Score = 876 bits (453), Expect = 0.0
Identities = 477/485 (98%)
Strand = Plus / Plus
Query: 4 ggaattccacaagctaccattttgttcccatcatggagatgcctctggaccactcagtca 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacaagccagcattttgttcccatcatggagatgcctctggaccactcagtca 263
Query: 64 caccacagcagcttcaggaccctcgggtgtttgtgacatccatggctgggtaggacagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caccacagcagcttcaggaccctcgggtgtttgtgacatccatggctgggtaggacagga 323
Query: 124 tttggggtttgcacatatgcatccctgccaggaactgttagaactccgattcaggaacct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttggggtttgcacatatgcatccctgccaggaactgttagaactccgattcaggaacct 383
Query: 184 cataggatttgattaccactctttggtatttaatgagtatctgcttctattctgagtatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cataggatttgattaccactctttggtatttaatgagtatctgcttctattctgagtatt 443
Query: 244 tgttattccaaacaatatgcccacatctaaaataccttttaactaggcttgagggactca 303
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 tgttattgcaaacaatatgcccacatctaaaataccttttaactagacttgagggactca 503
Query: 304 gggagacacagtgataaaatacagagagatgaattttacagtcatgatttaaatgtctgc 363
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 504 gggagacacagtgataaaatacagagagatgaatttcacagtcatgatttaaatatctgc 563
Query: 364 taaaattgaaacaaacgaatcttattatttaatgagaaatttcacccactttgtatctat 423
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaattgaaacaaaagaatcttattatttaatgagaaatttcacccactttgtatctat 623
Query: 424 aatttataccttattgactgttgtgagaccatcacctcagtgccctgcattctataacta 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 aatttataccttattgactgttgtgagaccatcacctcagtgccctgcattctagaacta 683
Query: 484 gatct 488
|||||
Sbjct: 684 gatct 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_h08.g1 MSMg01no377_h08.g1 CHROMAT_FILE:
MSMg01no377_h08.g1 PHD_FILE: MSMg01no377_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:38 2005
(425 letters)
>mm_chr17_67879728_67880551
Length = 824
Score = 768 bits (397), Expect = 0.0
Identities = 418/425 (98%), Gaps = 1/425 (0%)
Strand = Plus / Minus
Query: 1 cttctcacatgtacatgtgtaggttttggaagcaggagagttgtgaaaactcatcacccc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 cttctcacatgtacatgtgtaggttttggaagcaggagagttgtgagaactcatcacccc 565
Query: 61 agcagactcgtaagaagtggaagtcatatccttcatacagaaggttgctgcgagataaaa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 564 agcagactcgtaagaagtggaagtcatgtccttcatacagaaggttgctgcgagataaaa 505
Query: 121 cctggatctagacaaagacttacactagtgacatgacatcattagaatgtgggtaaggat 180
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 504 cctggatctacacaaagacttacactagtggcatgacatcattagaatgtgggtaaggat 445
Query: 181 tagcagtcattttaaccagtaataaggtgggactctggggtttgtaacatatgtgaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagcagtcattttaaccagtaataaggtgggactctggggtttgtaacatatgtgaagct 385
Query: 241 acactgtaggcaacaacgtcctagagatgttcagggagaaactttgttctcactgtagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acactgtaggcaacaacgtcctagagatgttcagggagaaactttgttctcactgtagag 325
Query: 301 tgcaagaaggcagtgtgagctcactggaaggttcgctagggtaaggcactcacatacaac 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 tgcaagaaggcagtgtgagctcactggaaggttcgctagggtaaggca-tcacatacaac 266
Query: 361 gtaagaccacaggaaccatctgcctgagaaacaaagaactggagctaataagccagcact 420
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 265 gtaagaccacaggaaccatctgcctgagaaacaaggaactggagctaataagccagcatt 206
Query: 421 gcaga 425
|||||
Sbjct: 205 gcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 824
Length adjustment: 9
Effective length of query: 416
Effective length of database: 815
Effective search space: 339040
Effective search space used: 339040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
