Query= MSMg01no381_i16.b1 MSMg01no381_i16.b1 CHROMAT_FILE:
MSMg01no381_i16.b1 PHD_FILE: MSMg01no381_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:59 2005
(499 letters)
>mm_chr17_49981645_49982541
Length = 897
Score = 549 bits (284), Expect = e-160
Identities = 308/316 (97%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 183 actaccctcagtcctccataaccatatgagccctgaaccaccctaagtcaagttgatctg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 actaccctcagtcctccataaccatatgagccctgaaccaccctaagtcaagttgatctg 838
Query: 243 cctcttgatagctggtgctggtgtggtcattcttcttaagggtttctacatgccctcctc 302
|||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||
Sbjct: 837 cctcttgatagctggtgctggtgtggtcattcaccataagtgtttctacatgccctcctc 778
Query: 303 ccatctccatttggagtctctgctctctttgcccttgtggaccatattggctgatgaacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ccatctccatttggagtctctgctctctttgcccttgtggaccatattggctgatgaacc 718
Query: 363 atgatggcggggaaaaccacaaggaggtaggaccaaagactgaagctccagaagctgctc 422
||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 717 atgatggtggggaaaaccacaaggag-taggaccaa-gactgaagctccagaagctgctc 660
Query: 423 acacatagaatacaccagagctggagggcaggagatgacatccctcttggttaccatggg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 acacatagaatacaccagagctggagggcaggagatgacatccctcttggttaccatggg 600
Query: 483 atatgtaacgctgagc 498
| ||||||||||||||
Sbjct: 599 agatgtaacgctgagc 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 897
Length adjustment: 10
Effective length of query: 489
Effective length of database: 887
Effective search space: 433743
Effective search space used: 433743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_i16.g1 MSMg01no381_i16.g1 CHROMAT_FILE:
MSMg01no381_i16.g1 PHD_FILE: MSMg01no381_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:59 2005
(445 letters)
>mm_chr17_49843978_49844823
Length = 846
Score = 814 bits (421), Expect = 0.0
Identities = 442/453 (97%), Gaps = 9/453 (1%)
Strand = Plus / Plus
Query: 1 attcgcatgagtgtttgtcgggaaaggtctggttttattgacagcacaatgctgctgacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 attcgcatgagtgtttgtcgggaaaggtctggttttattgacagcacaatgctgatgacc 260
Query: 61 cattgcttgcgttgtttagatcatgtttattccttagagaaaatgtaagt--ccccccac 118
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 cattgcttgcgttgtttagatcatgtttattccttagagaaaatgtaagtgtccccccac 320
Query: 119 ccccagctttatagagaataaatgaccggttcctgatgttttcagtcttcagaatttgct 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccc-agctttatagagaataaatgaccggttcctgatgttttcagtcttcagaatttgct 379
Query: 179 tctgatggttttaaat------aataataataataataataataataataataataaact 232
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctgatggttttaaatgataataataataataataataataataataataataataaact 439
Query: 233 gcattaatccagtccctgacagaacccttgtttcctctaaaacctcgagtgcctggcctc 292
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 gcattaatccagtccctgacagaacccttgtttcctctaaaacctcgagagcctggcctc 499
Query: 293 cactctctgtgcctctctcttatgattctggtactctaaactcccatgcactgtaatgac 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cactctctgtgcctctctcttatgattctggtactctaaactcccatgcactgtaatgac 559
Query: 353 ccttcatactcttccgacagcattcaagaccatttctagcccaaaggttacaactcttcc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccttcatactcttccgacagcattcaagaccatttctagcccaaaggttacaactcttcc 619
Query: 413 acatccttgccacaaaacactctcaaaggccta 445
|||||||||||||||||||||||||||||||||
Sbjct: 620 acatccttgccacaaaacactctcaaaggccta 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 846
Length adjustment: 10
Effective length of query: 435
Effective length of database: 836
Effective search space: 363660
Effective search space used: 363660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
