XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGG
CCTATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACA
TCAAAGTAAATGGAGAGAAGCTGGAAGCCCCACTAAAATCAGGGACTAGA
CAAGGCTGCCCACTTTCTCCCTAGCTTTTCAACATAGTACTTGAAGTATT
AGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAA
AAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATA
AGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTT
CGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTC
TCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCC
TTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAA
TGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAAGAAGAAA
TTAAGGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGC
AGGATCCACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATT
TCATGCAATCCCCATCAAAATTCCAACTCCATTCTTTCACGAATTTGGAA
GGAGCAATTTGCAAATTTGTCTGGGAAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTATACTATTAATCATTAAAGAC
CAAGGGATCCCATAGACTAGTTGTTCTTCCCTGTAAGTCACGACCCTCGT
GGGGGTCGAAAAACCCTTTCCAACTCAAAAGAGTAGCAAAATTACAGTTA
TGAGGTAGCAACAAAAGTAATTTTATGGTTGGGGTCATTACAACATGAGG
CACTCTATTAAAGGGTTGTAGCATTAGGAAGGCTGAGAACCACTGTTTTA
GGCAGAAACTTGATTAGACAGCAGATTGAGTTCATTATTTCCCCCGAGTT
TTGATAATTGAAGATGCTTTCTTACCTTGTCATGTTCTTGTATGCAGTCA
ACAAAGTGATAGAAATAGTTAACACATTAACACCATGAAGCCTCACCTAT
TCAGTTGAATATAATTAGAGATTTTTAGTAGTAAGCCTTTAGAGACAAGA
TTGTACCTGTTATTTATATTTAATATAGATTAAAAATTCTTTCTGCTTAT
TATTAAAAACAGTTGGAACTATAGCTTGCATTTCAACATGTGGTTGTTTT
AAGTGTCTTTGCATCATCCTGAAAATTGTATTCTTAAATTTGACCAATTA
AATTGATTAATTAAAATCATCTTTATTTTTCTTCACCATCCCCATTTTTT
CATTTTTAAAATGTATTATTGGTCTAAATGTCTN

Query= MSMg01no381_n01.g1 MSMg01no381_n01.g1 CHROMAT_FILE:
MSMg01no381_n01.g1 PHD_FILE: MSMg01no381_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:20 2005
         (579 letters)



>mm_chr17_82843464_82844442
          Length = 979

 Score = 1104 bits (571), Expect = 0.0
 Identities = 577/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actatactattaatcattaaagaccaagggatcccatagactagttgttcttccctgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 actatactattaatcattaaagaccaagggatcccatagactagttgttcttccctgtag 260

                                                                       
Query: 61  gtcacgaccctcgtgggggtcgaaaaaccctttccaactcaaaagagtagcaaaattaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcacgaccctcgtgggggtcgaaaaaccctttccaactcaaaagagtagcaaaattaca 320

                                                                       
Query: 121 gttatgaggtagcaacaaaagtaattttatggttggggtcattacaacatgaggcactct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttatgaggtagcaacaaaagtaattttatggttggggtcattacaacatgaggcactct 380

                                                                       
Query: 181 attaaagggttgtagcattaggaaggctgagaaccactgttttaggcagaaacttgatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaaagggttgtagcattaggaaggctgagaaccactgttttaggcagaaacttgatta 440

                                                                       
Query: 241 gacagcagattgagttcattatttcccccgagttttgataattgaagatgctttcttacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagcagattgagttcattatttcccccgagttttgataattgaagatgctttcttacc 500

                                                                       
Query: 301 ttgtcatgttcttgtatgcagtcaacaaagtgatagaaatagttaacacattaacaccat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtcatgttcttgtatgcagtcaacaaagtgatagaaatagttaacacattaacaccat 560

                                                                       
Query: 361 gaagcctcacctattcagttgaatataattagagatttttagtagtaagcctttagagac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagcctcacctattcagttgaatataattagagatttttagtagtaagcctttagagac 620

                                                                       
Query: 421 aagattgtacctgttatttatatttaatatagattaaaaattctttctgcttattattaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagattgtacctgttatttatatttaatatagattaaaaattctttctgcttattattaa 680

                                                                       
Query: 481 aaacagttggaactatagcttgcatttcaacatgtggttgttttaagtgtctttgcatca 540
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacagttggaactattgcttgcatttcaacatgtggttgttttaagtgtctttgcatca 740

                                                  
Query: 541 tcctgaaaattgtattcttaaatttgaccaattaaattg 579
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcctgaaaattgtattcttaaatttgaccaattaaattg 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)