CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCGAGCTGCGCGGAAT
TCTCTGCTCTTACGAAACATGGAAAGAGCTTAGCCCAGCATCAACAAATC
CCATGGTTCCATCACTGCATAAAACATGGACCAAGCAGGCTTTGTTCAAT
TGCAACCCCACACTCAAGAGTTGAAAAAAATGATGAGCAGTTCACAGTCA
TTGGTTGTATAGTGAGTAATGACAGTCCAAGATATGTGAGCCCTTTTTTT
TTCTCCAGAAGAATAGGAGGAGGAGGGAGGGGGGAGGAGAATCGAGAGAG
AGAGAGAGAGAGAGATATTTTTTTAGAGACAGAGAGAGAGACACCTTCCT
ATTTTTATTTTTTTTTTCCCCCCCCCCCCCCTCACCTTTCTATCTTTTTT
ACCTCCTTCACTCCCTTCTCTTTCCCCCCCCCTTTTTTTTTTTCCTATTT
TTATATCCTCCCATTCTCTCTTCGCTGCTTATTTTTTCTTCATCCTTTTT
TCTTATATCCATTCTTAAATTTCCTTACCCTGCCATCCTATCCTGCCGCC
TTATACTTACCTTATTCTCTCCCCATTCTTCTTTCACCTTTTCACTACCC
CCCTCTTTATTATCTTTCTATTTTACTATCTCGTAACGCATATGTCACCC
TCTCTTTATACTCTTCTTTTTATCCCCCCCCTTTCCTCCTATATTACAAT
ATATTGTCTCTTTCACCTCTCCCTCTCTTTCTTATACGATTACCTATTTA
TATATATCTCTTCTCCTACTACTTCCTATAATAATCTTGCATCCTTTCTT
TATCTATCTGTACACTATCCCTATTTGTCCTGTTTTACACACCTTCTTCC
TTCTATGTTCT

ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTCTCAGAAATTCTTTATAGGAAGAGTAGAGGACAGGAGAT
AATGTCTGTGTGAGTATTTATTTGTTTTAAAGGAAAGAACCACAAAAAAT
GTGAAATTAATGAAGTTTCTGGATAAGCTTGTGCTTCAAGTCCCATCATC
TAATTTAAACAAACACCCTGAATGCTTCTAATTACAAAATCCACCACGGA
ATGATGAAGACTGCTGAGTCTTTAGAAATGTCCATTTTCTTTCCTTAATA
TTTTTTCTATTTGTACACACTATTTAAACCTAATTAAAGTAATCACAGAG
ATAACAAACCCTAATGAAGATTTATTTTGGATGTATATTTTTAAGTGATA
TCCAAAGTGAGCAAAGGACAGATAACTGAAAGATGCAGTTTCCAAGGTCA
AAGTCAAAGTGTGTTAAATTAAATTTTTGAAAGAAAGATCTTTCTCTATT
ATGGGTAAGGATAGAATATTGGTGATGTCTCCCATTTAGCACTGCCCCTA
TACCAAATGGCAACCCAGAGACACACTCATACACTCACATATGCTATGTA
AATATGTCTCTGAATATAGTATATCACTTATCTCTGAGCTTATGCACTAT
GTTCTGGGTTTAAAACACTTGCAAGCCTAGCATGTTGGAAGCAAAGACTA
GTATATCCCTATTGCGCTTGGTGCCAGTCAACCTTGTC

Query= MSMg01no386_c07.g1 MSMg01no386_c07.g1 CHROMAT_FILE:
MSMg01no386_c07.g1 PHD_FILE: MSMg01no386_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:54 2005
         (604 letters)



>mm_chr17_58673115_58674116
          Length = 1002

 Score = 1042 bits (539), Expect = 0.0
 Identities = 588/605 (97%), Gaps = 4/605 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctttataggaagagtagaggacaggagataatgtctgtgtgagtatttatttgtttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttataggaagagtagaggacaggagataatgtctgtgtgagtatttatttgtttt 260

                                                                       
Query: 61  aaaggaaagaacca-caaaaaatgtgaaattaatgaagtttctggataagcttgtgcttc 119
           ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 aaaggaaagcaccagaaaaaaatgtgaaattaatgaagtttctggataagcttgtgcttt 320

                                                                       
Query: 120 aagtcccatcatctaatttaaacaaacaccctgaatgcttctaattacaaaatccaccac 179
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aagtcccatcatctaatttaaacaaacaccccgaatgcttctaattacaaaatccaccac 380

                                                                       
Query: 180 ggaatgatgaagactgctgagtctttagaaatgtccattttctttccttaatattttttc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaatgatgaagactgctgagtctttagaaatgtccattttctttccttaatattttttc 440

                                                                       
Query: 240 tatttgtacacactatttaaacctaattaaagtaatcacagagataacaaaccctaatga 299
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttgtacacactaattaaacctaattaaagtaatcacagagataacaaaccctaatga 500

                                                                       
Query: 300 agatttattttggatgtatatttttaagtgatatccaaagtgagcaaaggacagataact 359
           | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 acatttattttggatgtat-tttttaagtgatatccaaagtgagctaaggacagataact 559

                                                                       
Query: 360 gaaagatgcagtttccaaggtcaaagtcaaagtgtgttaaattaaatttttgaaagaaag 419
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 gaaagatgcagtttccaaggtcaaagtcaaagtgtgttaaatgaaatttttgaaagaaag 619

                                                                       
Query: 420 atctttctctattatgggtaaggatagaatattggtgatgtctcccatttagcactgccc 479
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 atctttctctattatgggtaaggatagaatattggtgatgtctcctatttagcactgccc 679

                                                                       
Query: 480 ctataccaaatggcaacccagagacacactcatacactcacatatgctatgtaaatatgt 539
           ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 680 ctataccaaatggcaacccagagacacactcatacactcacatgtgctgtgtaaatatgt 739

                                                                       
Query: 540 ctctgaatatagtatatcacttatctctgagcttatgcactatgttctgggtttaaaaca 599
           ||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||||||
Sbjct: 740 ctctggatatagtatatcacttgtctctgagcttatgcact--gttctgggtttaaaaca 797

                
Query: 600 cttgc 604
           |||||
Sbjct: 798 cttgc 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1002
Length adjustment: 10
Effective length of query: 594
Effective length of database: 992
Effective search space:   589248
Effective search space used:   589248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)