Query= MSMg01no391_l23.b1 MSMg01no391_l23.b1 CHROMAT_FILE:
MSMg01no391_l23.b1 PHD_FILE: MSMg01no391_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:04 2005
(386 letters)
>mm_chr17_78625636_78626421
Length = 786
Score = 723 bits (374), Expect = 0.0
Identities = 383/386 (99%)
Strand = Plus / Plus
Query: 1 acgagctaattatactgtttccaaactgcaacaagatttgccgggaaggcaagccaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgagctaattatactgtttccaaactgcaacaagatttgccgggaaggcaagccaagca 260
Query: 61 tttttgttagcgatacttaaaattaaattccgtgcttttgtgaagggagtaaaaattata 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tttttgttaacgatacttaaaattaaattccgtgcttttgtgaagggagtagaaattata 320
Query: 121 gcttcttctgtttttgaaacacctgttttgttgaggagagacatcctcttgcccctggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcttctgtttttgaaacacctgttttgttgaggagagacatcctcttgcccctggac 380
Query: 181 ttggaggatttggttttcctctgcagctggagtcccccgtgcttaggaagtgaactcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggaggatttggttttcctctgcagctggagtcccccgtgcttaggaagtgaactcttc 440
Query: 241 ctaagccccaagttgtcctgaatggcatccaatgccccattgttgttctgcatctgtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaagccccaagttgtcctgaatggcatccaatgccccattgttgttctgcatctgtgtg 500
Query: 301 gaacaagggtgttgtctctcttccctcttctcacatgatagctataaagccctgggtcaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gaacaagggtgttgtctctcttccctcttctcacatgatagctctaaagccctgggtcaa 560
Query: 361 gtggtccgaagtattcctaactagaa 386
||||||||||||||||||||||||||
Sbjct: 561 gtggtccgaagtattcctaactagaa 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_l23.g1 MSMg01no391_l23.g1 CHROMAT_FILE:
MSMg01no391_l23.g1 PHD_FILE: MSMg01no391_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:04 2005
(250 letters)
>mm_chr17_78785119_78785768
Length = 650
Score = 429 bits (222), Expect = e-125
Identities = 245/260 (94%), Gaps = 12/260 (4%)
Strand = Plus / Minus
Query: 3 gttattccctgccccttgcctccgtcaacctgcaggatggaaacataacctccaggtgat 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gttattccgtgccccttgcctccgtcaacctgcaggatggaaacataacctccaggtgat 278
Query: 63 atggctcatgaggaggtggccacgggccaaggcatagattcctgatgtttcttcacatgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atggctcatgaggaggtggccacgggccaaggcatagattcctgatgtttcttcacatgg 218
Query: 123 cttggcaccatgag------------tgggcacatcattggcatttatgggatttttaag 170
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 217 cttggcaccatgagtaaaggctcagttgggcacatcattggcatttatgggatttttaag 158
Query: 171 aatatatatataaagaaagatacttgggtatacagttgagcctcgccgggagaatgtggg 230
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 157 aatatatatataaagaaagatacttgggtgtacagttgagcctcaccgggagaatgtggg 98
Query: 231 gccctgagatttaaaaagtt 250
||||||||||||||||||||
Sbjct: 97 gccctgagatttaaaaagtt 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
