Query= MSMg01no393_d13.b1 MSMg01no393_d13.b1 CHROMAT_FILE:
MSMg01no393_d13.b1 PHD_FILE: MSMg01no393_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:04 2005
(581 letters)
>mm_chr17_70433614_70434594
Length = 981
Score = 992 bits (513), Expect = 0.0
Identities = 519/521 (99%)
Strand = Plus / Minus
Query: 6 ggaattctataaaggactgaatagaactctgtatttataccttcaacattaatttaacaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggaattctataaaggactgaatagaactctgtatttataccttcaacattaatttaacaa 462
Query: 66 gagtccccatgtagcactgtcaatagcaacatacacagactatttttatatagccaacat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gagtccccatgtagcactgtcaatagcaacatacacagactatttttatatagccaacat 402
Query: 126 aaaaaatatatcgtcaaactaaattgttttattcaatgatgcattagaaagttttgaaaa 185
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaaaaatatgtcgtcaaactaaattgttttattcaatgatgcattagaaagttttgaaaa 342
Query: 186 agaaaactactctaatgttcaatcatgcctagaaagtgaatccactggggtttggagagg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaaaactactctaatgttcaatcatgcctagaaagtgaatccactggggtttggagagg 282
Query: 246 cttagtgttagaggttttgccctccatgtgagaaaaactgggtctggacatggccaagga 305
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 281 cttagtgttagaggttttgccctccatgtgagaagaactgggtctggacatggccaagga 222
Query: 306 cacatgcacacacagacattgaaatagtaaatggcttttggtagtcattttcacaatatt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cacatgcacacacagacattgaaatagtaaatggcttttggtagtcattttcacaatatt 162
Query: 366 aattcttctaacccatgagcatggaatgcctttgtatttccaagtgtctttccctgtctc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aattcttctaacccatgagcatggaatgcctttgtatttccaagtgtctttccctgtctc 102
Query: 426 tttcttcagagattgaaagttttcattgtcaaggccatattttccttggttagatttatt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tttcttcagagattgaaagttttcattgtcaaggccatattttccttggttagatttatt 42
Query: 486 tctagatattgtgaatgaaaatatgtttatgatctcctctg 526
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tctagatattgtgaatgaaaatatgtttatgatctcctctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_d13.g1 MSMg01no393_d13.g1 CHROMAT_FILE:
MSMg01no393_d13.g1 PHD_FILE: MSMg01no393_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:04 2005
(558 letters)
>mm_chr17_70238507_70239464
Length = 958
Score = 975 bits (504), Expect = 0.0
Identities = 543/558 (97%), Gaps = 4/558 (0%)
Strand = Plus / Plus
Query: 1 atctattcctaagatcagagcactcatggtccaaaatcttcccaaagggcctctgatgag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atctattcctaagatcagagcactcatggtccaaattcttcccaaagggcctctgatgag 260
Query: 61 tactgttgcataagcttttggggagggggtgcatctaagatctaaacccttctagcttta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 tactgttgcataagcttttggggagggggtgcatctaagttctaaacccttctagcttta 320
Query: 121 taaaacaattagcttataatatgacacatgggtcatgttgttcagatctcatcagtcatt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaacaattagcttatgatatgacacatgggtcatgttgttcagatctcatcagtcatt 380
Query: 181 ctaataacgttttacatctgtgttattaatttcattttggcctacaacccaaatgttgaa 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ctaataacgttttacatctgtgttattaatttcattttggcctagaacccaaatgttgaa 440
Query: 241 gtatcagctgttaatgtttttgtctctcctcacccagagaaatccccacatttcttttct 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatcagctgttactgtttttgtctctcctcacccagagaaatccccacatttcttttct 500
Query: 301 ttgtcctccacaatactgctttcaagatcatactcatatccctagatctgtgctcttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtcctccacaatactgctttcaagatcatactcatatccctagatctgtgctcttcaa 560
Query: 361 ttcgaatttgtctgactcatgctcaacttgccaacaagatgacaccatcagtggaggttt 420
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ttcgaatttgtcagactcatgctcaacttggcaacaagatgacaccatcagtggaggttt 620
Query: 421 tctgtaggtcacagtgaggggctcatggtgtctctttctctgtgatattaaagtgcagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 tctgtaggtcacagtgaggggctcatggtgtctctttctctgtgatattaaagtgtagtc 680
Query: 481 tctgggagtgtcctatcgacagactacatcatcgattagctcttgtgctgcttcttttat 540
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 681 tctgggagtgtcctatcgacagactatatcatcgattagctcttgtgctgctccttttat 740
Query: 541 aaaaaaaaaataatcaag 558
|| ||| ||||||||
Sbjct: 741 aacaaa----taatcaag 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
