Query= MSMg01no394_e06.b1 MSMg01no394_e06.b1 CHROMAT_FILE:
MSMg01no394_e06.b1 PHD_FILE: MSMg01no394_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:35 2005
(428 letters)
>mm_chr17_79910534_79911365
Length = 832
Score = 793 bits (410), Expect = 0.0
Identities = 422/428 (98%), Gaps = 4/428 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagtgttgctcctctgggtgactctcaggggaagcctatgtcacagaatgttt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagtggtgctcctctgggtgactctcaggggaagcctatgtcacagaatgttt 264
Query: 65 tcatcagaacaacagccccgcctgggtccaaagcgtcaccaagactttttttctattttc 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatcagaacaacagccccgcctgggtccaaagcgtcaccaagactttttttctattttc 324
Query: 125 acaagctaccaaacaatcagctcaaatgcgccatgggcccttatcctgaggcaaccctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaagctaccaaacaatcagctcaaatgcgccatgggcccttatcctgaggcaaccctga 384
Query: 185 acttcatcttcttagagtctaacattatccattatggacattctctaactgcttttaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acttcatcttcttagagtctaacattatccattatggacattctctaactgcttttaaat 444
Query: 245 cactggagaactgttttaaagtctaatgacactccggcacctatcaaacaaacaaacaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactggagaactgttttaaagtctaatgacactccggcacctatcaaacaaacaaacaaa 504
Query: 305 aaaaaaa----caagacaggactctgcgcaagccagggtacaagcagtttctatacatct 360
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaaaaaaaaacaagacaggactctgcgcaagccagggtacaagcagtttctatacatct 564
Query: 361 cttcaagggagtccagcatgcagtgtggcctgagagccaccaatgatgatccccctctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcaagggagtccagcatgcagtgtggcctgagagccaccaatgatgatccccctctgt 624
Query: 421 caggggtg 428
||||||||
Sbjct: 625 caggggtg 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 832
Length adjustment: 9
Effective length of query: 419
Effective length of database: 823
Effective search space: 344837
Effective search space used: 344837
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_e06.g1 MSMg01no394_e06.g1 CHROMAT_FILE:
MSMg01no394_e06.g1 PHD_FILE: MSMg01no394_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:35 2005
(430 letters)
>mm_chr17_79969411_79970240
Length = 830
Score = 704 bits (364), Expect = 0.0
Identities = 407/430 (94%), Gaps = 14/430 (3%)
Strand = Plus / Minus
Query: 1 ttgccagaacatgcccccttcatgtcatcagctccttgctcattggtccacagagactat 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 548 ttgccagaacatgcccccctcatgtcatcagctccttgctcattggtccacagagattat 489
Query: 61 tctgagcctgtccttcctggtatctttggtctcctacctaagctttgctgtttttctatg 120
|||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 488 tctgagcctgtccttcttggtat--------------ctaagctttgctgtttttctatg 443
Query: 121 gcagttcttattagcttatttggtagattcctcgctaccacttgggtaccctcactgact 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 442 gcagttcttattagcttatttggtagattccttgctaccacttgggtaccctcactgact 383
Query: 181 ccaaaagccacagtgttgggcttttctctctttttcttcgttgtaccattcgtacctaga 240
||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 382 ccaaaagccacagtggtgggcttttctctctttttctttgttttaccattcatacctaga 323
Query: 241 acactttctacctggcacgtaggagtgttagggctgagaaagcagtgcctctcgttatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acactttctacctggcacgtaggagtgttagggctgagaaagcagtgcctctcgttatgg 263
Query: 301 tgttttggcatgatgaggatgataaactactgaaggacactaggaggccttagacttaga 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgttttggcatgatgaggattataaactactgaaggacactaggaggccttagacttaga 203
Query: 361 gggacagtctctatgactctctcctgctctactgtctccaaatcctctcgcctaaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gggacagtctctatgactctctcctgctctactgtctccaaatcctctcgcctaaatcaa 143
Query: 421 gtcacaggaa 430
||||||||||
Sbjct: 142 gtcacaggaa 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
