NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCC
GCGGAATTCTCACCTGTTGACCACCGAATGGCAGAGAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCTTCTGGCAGTTAC
TTAGAAAATTGGACATAGTACTACCGGATTATTCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTGCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTATACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGC
CCAATGGATGGACCTGGAGGGCATCATCCTGCGTGAGGTAACACATTCAC
AAAGGAACTCACACCATATGTACTCCCTGATAAGTGGATATTAGCCCCCA
ACCTAGGATACCCCAGAAATAAGAAACAAATTTCCTAACCCCTGAAACTC
TCCAAAAATGAAAAACGAAGTGGGGGACATTTATGTCCCCCCCTTAAAAA
GGGGAAAAATACCCCCTTGTCAGGACTTTCTTA

NNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTACTTCATTTCTGCATAGTCT
ACCCCCTGTCCTCAGAGGGAGACTGTGAAGAAAGAATGATTCAGCTTCCC
ATGCTTTCTTTTGCTATTTCCTGTTTATAGTTTTCATCTATACTGACTGT
AAATAAGGGTGCCAGGGTAGTGATTATGTGTATATAAATATACAAAGACC
TTAGAAGAGGAATTTTAAAGAACAGTTGCAAGTTTTGTCATTTTTCTAAT
ACTTTAATCTATTTTGACCTTTTCCCTTTAATAAGAAAATACAATCACAA
TGAACTGCATATCTTGTCGGTTTAGGCTCACTCAACCCATTTTTTTGTGA
AATGGATCATTTTGAATTTTCAATAAAGTTTAAACAACTGCTGATAATGC
TCACAATGTCCCTTCTCAAGGAGTCACCAAGTCCTACATCCTTTATATGC
TGCTAAAGACCACTTAGTGTGGGATACACTCTACTTTTTTTCTAGAACAC
ATATAAATGAAATACTGTGTATTAAAGGTGTGATGTCCTGTTTTAAAAAC
TGTGTTTACAGTCCAAAGAATTTAATAATCTTTTTTATTAATGGAAAAAA
TTGCCTCCAGCTTTTAAATGTTTTGGGGTGACAAAAGGTTATTATTATTA
AAAACTCTAGAACATTCCCCCATTTTAAAACCATTTACCTTTTGTTTCCA
AACCATAAAACTCCCCCCCGGGACCCCGGAAGGCCCCACTTCTAATATG

Query= MSMg01no400_h19.g1 MSMg01no400_h19.g1 CHROMAT_FILE:
MSMg01no400_h19.g1 PHD_FILE: MSMg01no400_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:49 2005
         (431 letters)



>mm_chr17_40635834_40636664
          Length = 831

 Score =  818 bits (423), Expect = 0.0
 Identities = 429/431 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctacttcatttctgcatagtctaccccctgtcctcagagggagactgtgaagaaagaatg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 631 ctacttcatttctgcatagtctaccccctgtcctcagagggagactgtgaggaaagaatg 572

                                                                       
Query: 61  attcagcttcccatgctttcttttgctatttcctgtttatagttttcatctatactgact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 attcagcttcccatgctttcttttgctatttcctgtttatagttttcatctatactgact 512

                                                                       
Query: 121 gtaaataagggtgccagggtagtgattatgtgtatataaatatacaaagaccttagaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtaaataagggtgccagggtagtgattatgtgtatataaatatacaaagaccttagaaga 452

                                                                       
Query: 181 ggaattttaaagaacagttgcaagttttgtcatttttctaatactttaatctattttgac 240
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 451 ggaattttaaagaacagttgcaagttttgccatttttctaatactttaatctattttgac 392

                                                                       
Query: 241 cttttccctttaataagaaaatacaatcacaatgaactgcatatcttgtcggtttaggct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttttccctttaataagaaaatacaatcacaatgaactgcatatcttgtcggtttaggct 332

                                                                       
Query: 301 cactcaacccatttttttgtgaaatggatcattttgaattttcaataaagtttaaacaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cactcaacccatttttttgtgaaatggatcattttgaattttcaataaagtttaaacaac 272

                                                                       
Query: 361 tgctgataatgctcacaatgtcccttctcaaggagtcaccaagtcctacatcctttatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgctgataatgctcacaatgtcccttctcaaggagtcaccaagtcctacatcctttatat 212

                      
Query: 421 gctgctaaaga 431
           |||||||||||
Sbjct: 211 gctgctaaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space:   346884
Effective search space used:   346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)