Query= MSMg01no403_n14.b1 MSMg01no403_n14.b1 CHROMAT_FILE:
MSMg01no403_n14.b1 PHD_FILE: MSMg01no403_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:17 2005
(370 letters)
>mm_chr17_57001867_57002636
Length = 770
Score = 315 bits (163), Expect = 2e-90
Identities = 190/199 (95%), Gaps = 5/199 (2%)
Strand = Plus / Minus
Query: 172 aagaaagaaaggaaagaaggaaagagagagaaagaaagaaagagagagagagaaagaaag 231
|||||||||| ||||||| |||||| | ||||||||||||||| | ||| ||||||||||
Sbjct: 633 aagaaagaaa-gaaagaaagaaaga-a-agaaagaaagaaaga-a-agaaagaaagaaag 579
Query: 232 aaagaaagtgagcaagtcttgtgtcctcaggggcctctgtgttggtatttatgccaccaa 291
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 578 aaagaaagtgagcaaatcttgtgtccccaggggcctctgtgttggtatttatgccaccaa 519
Query: 292 ctcggctgaggcctgccagtacgtcatccagcaggccaacgtgagtatcttgatagtgga 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctcggctgaggcctgccagtacgtcatccagcaggccaacgtgagtatcttgatagtgga 459
Query: 352 gaatgaccaacagctgcag 370
|||||||||||||||||||
Sbjct: 458 gaatgaccaacagctgcag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_n14.g1 MSMg01no403_n14.g1 CHROMAT_FILE:
MSMg01no403_n14.g1 PHD_FILE: MSMg01no403_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:17 2005
(232 letters)
>mm_chr17_56822521_56823152
Length = 632
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 1 aaggcttgctcctgtcccagccttggggctcctgttgtacctgcaccctcctctcctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcttgctcctgtcccagccttggggctcctgttgtacctgcaccctcctctcctgcc 260
Query: 61 ttgggctctgtccatcccttctatgctgccccggagaggagagtggccaacctatagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggctctgtccatcccttctatgctgccccggagaggagagtggccaacctatagcct 320
Query: 121 gcattgtcacccattttagttctggaactcagcattcaataaatatctgtgggttgtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gcattgtcacccattttagttctggaactcagcattcaataaatatctgtgggttgcatg 380
Query: 181 gggtcttgtttatgaagtagggtgttttctttttttaaagtttaattacatg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtcttgtttatgaagtagggtgttttctttttttaaagtttaattacatg 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
