Query= MSMg01no406_e21.b1 MSMg01no406_e21.b1 CHROMAT_FILE:
MSMg01no406_e21.b1 PHD_FILE: MSMg01no406_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:34 2005
(213 letters)
>mm_chr17_60488952_60489564
Length = 613
Score = 398 bits (206), Expect = e-115
Identities = 211/213 (99%)
Strand = Plus / Minus
Query: 1 tttttgncttatttttcttttgttttggataatggcctaagcttccatacactctcctag 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttttgtcttatttttcttttgttttggataatggcctaagcttccatacactctcctag 354
Query: 61 actattagttctgactctgcatgctcacaacacacataccattcaaccacaggactgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 actattagttctgactctgcatgctcacaacacacataccattcaaccacaggactgtct 294
Query: 121 acaaaaggcatagtgtcctctctctctttgtctctccctatcctatgcacctgcaaagat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 293 acaaaaggcatagtgtcctctctttctttgtctctccctatcctatgcacctgcaaagat 234
Query: 181 ttataatttgcttgtctggttgttattctctta 213
|||||||||||||||||||||||||||||||||
Sbjct: 233 ttataatttgcttgtctggttgttattctctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no406_e21.g1 MSMg01no406_e21.g1 CHROMAT_FILE:
MSMg01no406_e21.g1 PHD_FILE: MSMg01no406_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:34 2005
(518 letters)
>mm_chr17_60297124_60298041
Length = 918
Score = 820 bits (424), Expect = 0.0
Identities = 461/476 (96%), Gaps = 7/476 (1%)
Strand = Plus / Plus
Query: 1 agcatagtgacatactattggcttattcaaacatcagcag-aaaattac----atgtgca 55
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 198 agcatagtgacatactattggcttattcaaacatcagcagaaaaattacatgtatgtgca 257
Query: 56 gggtgtcagagttttgtgagttgttgactctgttgggatatcctttttatgtcctcacat 115
||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||||
Sbjct: 258 gggtgtcagagttttgtgagttgttga--ctgttgggatagccctgttatgtcctcacat 315
Query: 116 tcctctttatctttatggtcaagctgttcccaggaacgttttaactatggggcataccag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcctctttatctttatggtcaagctgttcccaggaacgttttaactatggggcataccag 375
Query: 176 gtttgtttttctttgttctcagccccaggcagcctctaggctcacaaacaacccagcaat 235
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 gtttatttttctttgttctcagccccaggcagcctctaggctcacaaacaatccagcaat 435
Query: 236 ttctgagtactttatatgacttacaggtcttgaaatttcatctttctttcagtacacctg 295
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 436 ttctgagtactttatatgacttacaggtcttgaaatttcaactttctttcagtatacctg 495
Query: 296 ccttgcatgtgcaatgccatggatttgatactcagcaccatattaggagcagaattttcc 355
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 496 ccttgcatgtgcaatgccatggatttgatactcagaaccatattaggagcagaattttcc 555
Query: 356 ttgctacaaaaaacaattatacacagatgagtttatttctaaggcacacttaattgctac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgctacaaaaaacaattatacacagatgagtttatttctaaggcacacttaattgctac 615
Query: 416 tctacactgtgtcctgatttactgtttttcatagcaatatttggttgcagttcata 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctacactgtgtcctgatttactgtttttcatagcaatatttggttgcagttcata 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
