Query= MSMg01no407_m23.b1 MSMg01no407_m23.b1 CHROMAT_FILE:
MSMg01no407_m23.b1 PHD_FILE: MSMg01no407_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:34 2005
(434 letters)
>mm_chr17_47960009_47960837
Length = 829
Score = 603 bits (312), Expect = e-177
Identities = 378/430 (87%), Gaps = 49/430 (11%)
Strand = Plus / Minus
Query: 6 gaattctctgtctctcg-atgagcttgagtgctttccttagagaggcatcaccgtagctc 64
||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 538 gaattctctgtctct-gaatgagcttgagtgctttccttagagaggcatcgccgtagctc 480
Query: 65 tttagcaggcccattctacaaatagaggaaactgaggcacctagaccagagcaggacaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tttagcaggcccattctacaaatagaggaaactgaggcacctagaccagagcaggacaca 420
Query: 125 agcctggcactcaagtctgcaggccccactctgctgtgcccacctgccgtgttggcataa 184
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 419 agcctggcactcaagtctgtaggccccactctgctgtgccca-----cgtgttggcataa 365
Query: 185 tcaatgtgcctcctagatctctagccagggaaacagggccaagtgtggaagtagggctca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcaatgtgcctcctagatctctagccagggaaacagggccaagtgtggaagtagggctca 305
Query: 245 ttctttttttttttttttttttagttttttgaggctcttgacttcttgggagagccatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttctttttttttttttttttttagttttttgaggctcttgacttcttgggagagccatgt 245
Query: 305 ccttagcctcctgcacacacacacacacacacacacacacacacacacacacacacacac 364
|||||||||||||||||||||||||||||||||||
Sbjct: 244 ccttagcctcctgcacacacacacacacacacaca------------------------- 210
Query: 365 acacacacacacacacaaacatagacactactgagaaaaggagatcacggccatagccac 424
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 209 -----------------aacatagacactactgagaaaaggaggtcacggccatagccac 167
Query: 425 agggagggcg 434
||||||||||
Sbjct: 166 agggagggcg 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 829
Length adjustment: 9
Effective length of query: 425
Effective length of database: 820
Effective search space: 348500
Effective search space used: 348500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_m23.g1 MSMg01no407_m23.g1 CHROMAT_FILE:
MSMg01no407_m23.g1 PHD_FILE: MSMg01no407_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:34 2005
(451 letters)
>mm_chr17_47784588_47785438
Length = 851
Score = 830 bits (429), Expect = 0.0
Identities = 448/459 (97%), Gaps = 8/459 (1%)
Strand = Plus / Plus
Query: 1 tttgaattctgcctggatgacatggttccctgatcccagcttgctcagagctcctggaat 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 tttgaattctgcctggatgacatggttctctgatcccagcttgctcagagctcctggaat 260
Query: 61 gtttaaataccagagtctcctctcaccagaatgatatctcccatgtacttatttgtaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaaataccagagtctcctctcaccagaatgatatctcccatgtacttatttgtaatg 320
Query: 121 tatgcacacacattttcttattgatttgggcagcatctttggtacagctgatgttatagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcacacacattttcttattgatttgggcagcatctttggtacagctgatgttatagg 380
Query: 181 ggaggaaatttaggggtctcaagtcagaggtgagttgtccagggtctcccagctcatacg 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggaagtttaggggtctcaagtcagaggtgagttgtccagggtctcccagctcatacg 440
Query: 241 tggataacctgggccatacacccaagctccctggttctaaatctaagg--------cttc 292
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tggataacctgggccatacacccaagctccctggttctaaatctaaggtttttccacttc 500
Query: 293 catgatctgtgccaacccttataaatgagcagatctttctagtgtcttgttggatataat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgatctgtgccaacccttataaatgagcagatctttctagtgtcttgttggatataat 560
Query: 353 ggaatacagggtcacatctcatttgagatttgtggtactgggatttgaactgagggcctt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaatacagggtcacatctcatttgagatttgtggtactgggatttgaactgagggcctt 620
Query: 413 gagctaggcaagcactttatccctgagccgcaatctcag 451
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 gagctaggcaagcactttatccctgagctgcaatctcag 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
