Query= MSMg01no407_o05.b1 MSMg01no407_o05.b1 CHROMAT_FILE:
MSMg01no407_o05.b1 PHD_FILE: MSMg01no407_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:40 2005
(513 letters)
>mm_chr17_63678792_63679705
Length = 914
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%), Gaps = 1/514 (0%)
Strand = Plus / Minus
Query: 1 atctttaacagaggaaattttagattctgttaggtaaaaggtgctgttttattttccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atctttaacagaggaaattttagattctgttaggtaaaaggtgctgttttattttccctt 655
Query: 61 gagtatatcaaagatatacaaatagatatttagttatactcattaatgtacattactaca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 654 gagtatatcaaagatatacaaatagatatttagttatactcattaatatacattactaca 595
Query: 121 gaaatttaaactgataattaaagatgtatattttctatttaaggtgaatatgtttacatt 180
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 594 gaaattaaaactgataattaaagatgtatattttctatttaaagtgaatatgtttacatt 535
Query: 181 ttcccccctttataaagga-tttttctttcaaatttgtgatttcaaatagaggaacaagg 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttcccccctttataaaggattttttctttcaaatttgtgatttcaaatagaggaacaagg 475
Query: 240 gagacacataagttaagagaagcagatatattcctgcactgcatgtcccagtaactggct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gagacacataagttaagagaagcagatatattcctgcactgcatgtcccagtaactggct 415
Query: 300 gcaaaatcttcagtgagaggtggtttcttggtctctttcactcattaccaccagtaaata 359
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 414 gcaaaatctggagtgagaggtggtttcttggtctctttcgctcattaccaccagtaaata 355
Query: 360 acttagtggctgttttattagcagttacaagacgtaaaaatatcaattgtaataatacta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acttagtggctgttttattagcagttacaagacgtaaaaatatcaattgtaataatacta 295
Query: 420 acattttaaatcccaggtatgtatccaattttaaaataccttataaaacttgtctaacca 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 294 acattttaaatcccaggtatgtatccaattataaaataccttataaaacttgtctaacca 235
Query: 480 gagctgtgtggattctccttattaattgaagttt 513
||||||||||||||||||||||||||||||||||
Sbjct: 234 gagctgtgtggattctccttattaattgaagttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_o05.g1 MSMg01no407_o05.g1 CHROMAT_FILE:
MSMg01no407_o05.g1 PHD_FILE: MSMg01no407_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:40 2005
(550 letters)
>mm_chr17_63509384_63510330
Length = 947
Score = 965 bits (499), Expect = 0.0
Identities = 534/547 (97%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 4 gattgcttatgtatgggaacttcggagaggtttcttcacagactgttgaaggcaaaagac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gattgcttatgtatgggaacttcggagaggtttcttcacagactgttgaaggcaaaagac 263
Query: 64 aagtcaggtccctaccttgtaccctgcagttctcagctgagctgcagcacttgcacaggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagtcaggtccctaccttgtaccctgcagttctcagctgagctgcagcacttgcacaggc 323
Query: 124 tggcaagtgctctacctcagagctccggcctcagctctgagggtttgttgtgtatgtgag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggcaagtgctctacctcagagctccggcctcagctctgagggtttgttgtgtatgtgag 383
Query: 184 gaagggaagctggaaatgggaggctactggcttgagtctatccaccacactgttacagac 243
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 gaagggaagctggaaatgggaggctactggcttgagtctatctgccacactgttacagac 443
Query: 244 tctgttcaatttctgtcttcattaccagccctcatgtctcatctggcctttagtattctt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 444 tctgttcaatttctgtcttcattaccagccctcatgtctcatctggccttta---ttcct 500
Query: 304 accttcttgtcagacatggccagaccaagaatggagtcctgggagaatcctgaatgcttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accttcttgtcagacatggccagaccaagaatggagtcctgggagaatcctgaatgcttg 560
Query: 364 tgaggaaactccaagaaaagaaggcaagagtcttgtgacctcaagttccctcataagcga 423
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 561 tgaggaaactccaagaaaagaagacaagagtcttgtgacctcaagttccctcaaaaacga 620
Query: 424 ggacttgttcttggcatgtgtttccctgcatctctcaggtgtagtggaatgtgttgactt 483
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 621 ggacttgttcttggcatgtgtttccctgcccctctcaggtgtagtggaatgcattgactt 680
Query: 484 cagattactcatcatggctgctgctggtactcacttaaatgcttaaaccattctttctct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagattactcatcatggctgctgctggtactcacttaaatgcttaaaccattctttctct 740
Query: 544 atgccga 550
|||||||
Sbjct: 741 atgccga 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 947
Length adjustment: 10
Effective length of query: 540
Effective length of database: 937
Effective search space: 505980
Effective search space used: 505980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
