Query= MSMg01no410_e17.b1 MSMg01no410_e17.b1 CHROMAT_FILE:
MSMg01no410_e17.b1 PHD_FILE: MSMg01no410_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(244 letters)
>mm_chr17_86082141_86082784
Length = 644
Score = 371 bits (192), Expect = e-107
Identities = 220/244 (90%), Gaps = 23/244 (9%)
Strand = Plus / Plus
Query: 1 aatagctgcgagttctgcacacctcaactcagaggaagttgggttgttccgtcggaacca 60
||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aatagctgcgagttctgcacacctcaactcagaggaag---------------------- 261
Query: 61 gagcaaaccagttccagggagcagggaccccaagggcccaaggattcgcctgagattggg 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 262 -agcaaaccagttccagggagcagggaccccaagggcccaaggatacgcctgagattggg 320
Query: 121 atttctcttcagatcggaggttgggggagtgggcttggtttaggcccaagtggaggaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctcttcagatcggaggttgggggagtgggcttggtttaggcccaagtggaggaatc 380
Query: 181 ctccaggagtctttccaaggttgtatatgttccccttgaactccaagagggtacaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccaggagtctttccaaggttgtatatgttccccttgaactccaagagggtacaaaggt 440
Query: 241 atag 244
||||
Sbjct: 441 atag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_e17.g1 MSMg01no410_e17.g1 CHROMAT_FILE:
MSMg01no410_e17.g1 PHD_FILE: MSMg01no410_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(421 letters)
>mm_chr17_86233826_86234646
Length = 821
Score = 814 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Minus
Query: 1 ttcagactatgtcaacatgctttcgtttctgtcccctgtcaatgaggcctgaggatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcagactatgtcaacatgctttcgtttctgtcccctgtcaatgaggcctgaggatataa 562
Query: 61 gggtgtcctgtgtaatttattgttcaaactgggaatattttaaaaaataaaaggcactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtgtcctgtgtaatttattgttcaaactgggaatattttaaaaaataaaaggcactgc 502
Query: 121 aaaatgcgatgaaataatgtaataattaaaacattggatgtcccaggaaaaccagactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatgcgatgaaataatgtaataattaaaacattggatgtcccaggaaaaccagactat 442
Query: 181 ggttaggaacagacagaatgtaatgcagcacgcactagaggtacaatcagaatgagtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttaggaacagacagaatgtaatgcagcacgcactagaggtacaatcagaatgagtagg 382
Query: 241 gacaaatgaattcccagattagaataccaggctgagttccctggggtggagcatttatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaaatgaattcccagattagaataccaggctgagttccctggggtggagcatttatgt 322
Query: 301 gggagcatcctggatgtcccgtgggatgggagggatcccgagggaggtggtggtcaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagcatcctggatgtcccgtgggatgggagggatcccgagggaggtggtggtcaccat 262
Query: 361 ctaaggcctctgctgatctgaccaggcactctggagccaagcgatctgcagagctgttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaggcctctgctgatctgaccaggcactctggagccaagcgatctgcagagctgttcc 202
Query: 421 a 421
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
