NNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTATATATTCTGGATTTTATCCCTCTGTCAGATGAAGGAT
TAGTGAAGATATTATGCCAATCTGTAGGCTGTCATTTTGTCACGATGTCA
GGGTCCTTTGACTTTGCTTTTAGGTTTCATGGGGTCCTATTTATTAATGC
CTGACTTTAGTGCTTTATTAAAATTAGGAGTAATTTTAATAAAGTTAGAG
GTCCATCAATTATTTGGCATTTTAATGCCTAATCATTCTAATGCACAAAA
TCACCTCCAGAATTCAGAGAAATTAAGGTTTATTTCATGAAACCATGCAT
ATAAACATTTTATGTCTTTTGCAGAAGATGAGGAAGTAAGTCTAAACCTA
AAAAGTACTTTTGGCAGAGGCAAGAAACTATACTCAGAGACATAAAATAG
TAAGTGCAACTGTTCCTGTCTTATGGCATTTTTAGATTAGAAAATATAAT
CTTTGAGTAACTGCTAACATTTCCAGCCCTGGGAATTTGAGTAATTCTCT
GTTATAACTAGATTATCAGCTTTTCTTAATGGGCAAATTATTAACTTTTA
AAGTAATGCAATTCTTTACTCGGTGATACTATCCTGGGCATATCCTTTCC
TTTCTATCTTAATATTTAAAGANAATGTGAGCCTACAATTCACAGNATAT
GAATTTTCTTTATATTGACTTTGTTATCCGCCACTAAGCCCTAATAAAAT
ATTTTGTACACC

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATTCTCTGGAGATTGCTTCATGNATTTTCAT
TGANCTTGGTACAGTTTGAGTTCTCAGGAGCAGGGGCAGNCATGAACGTG
CTCTCATGGNTTGGACCNTAAGCCTCGAGGAGGGGTGGAAAAAGATTCAA
NTCAAAATANNTTTATTTTTCTACCCCAAAAAGGAAGGGGTAGGGATATC
TTTTAATAATTTCCTGCCGTGAGAGGGCNCCTTGACGTGGGACCCCCTTT
AATATAAGTTATTTNNNTGCCATTTAATGNNNACCCCCCGAAAAAAAAAC
AGGGTTTCNCTGTGAAGAGAAAACCCAACAAAANNATGGTGGGAGAAAAA
TATACACCCCCCCCGCCCCCCGCGGGGGGGGNNNNGGGAAAAAGGAGAGG
GAGNGGNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGNN
NNNNNNCCACAAAAAAAAAAAAAAAACCCACNCCTCTTCTTTTTTTTTTT
TTTNNCGTAAAAAAAAAAACACAAANAGANGNTACNNNGGGGGGGACATT
TTCGGCTGGGTTTCTTCCTACGTCNNCTCNCCCTTCCTNNNTGTCCCCCC
NGCCCATACGAAAACAAACAAAAACATATGAGTAGCGGNNNNNNNGNNAN
NNNNNNNCCCNNNNNCCTCATAATTCNACAAACCCTTCCCCCTCCCTTCC
CATATCATCCAACCCNACCTAACCCATAACAACTTCCCCCCATCTAACNN
CNCCTTCTCACCATGTNNCCCNCCCNCGGGAGCATTCAGGGGGGGG

Query= MSMg01no411_p03.b1 MSMg01no411_p03.b1 CHROMAT_FILE:
MSMg01no411_p03.b1 PHD_FILE: MSMg01no411_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:09 2005
         (602 letters)



>mm_chr17_91809363_91810365
          Length = 1003

 Score = 1096 bits (567), Expect = 0.0
 Identities = 591/601 (98%), Gaps = 5/601 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttatatattctggattttatccctctgtcagatgaaggattagtgaagatatt 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 gaattctttatatattttggattttatccctctgtcagatgaaggattagtgaagatatt 906

                                                                       
Query: 65  atgccaatctgtaggctgtcattttgtcacgatgtcagggtcctttgactttgcttttag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 atgccaatctgtaggctgtcattttgtcacgatgtcagggtcctttgactttgcttttag 846

                                                                       
Query: 125 gtttcatggggtcctatttattaatgcctgactttagtgctttattaaaattaggagtaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gtttcatggggtcctatttattaatgcctgactttagtgctttattaaaattaggagtaa 786

                                                                       
Query: 185 ttttaataaagttagaggtccatcaattatttggcattttaatgcctaatcattctaatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttttaataaagttagaggtccatcaattatttggcattttaatgcctaatcattctaatg 726

                                                                       
Query: 245 cacaaaatcacctccagaattcagagaaattaaggtttatttcatgaaaccatgcatata 304
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 725 cacaaaatcacctccagaattcaaagaaattaaggtttatttcatgaaaccatgcatata 666

                                                                       
Query: 305 aacattttatgtcttttgcagaaga---tgaggaagtaagtctaaacctaaaaagtactt 361
            ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 665 tacattttatgtcttttgcagaagaagatgaggaagtaagtctaaacctaaaaagtactt 606

                                                                       
Query: 362 ttggcagaggcaagaaactatactcagagacataaaatagtaagtgcaactgttcctgtc 421
           |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||
Sbjct: 605 ttggcagaggcaagaaactatactcagagacataaattagtaagtgca--tgttcctgtc 548

                                                                       
Query: 422 ttatggcatttttagattagaaaatataatctttgagtaactgctaacatttccagccct 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttatggcatttttagattagaaaatataatctttgagtaactgctaacatttccagccct 488

                                                                       
Query: 482 gggaatttgagtaattctctgttataactagattatcagcttttcttaatgggcaaatta 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gggaatttgagtaattctctgttataactagattatcagcttttcttaatgggcaaatta 428

                                                                       
Query: 542 ttaacttttaaagtaatgcaattctttactcggtgatactatcctgggcatatcctttcc 601
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 427 ttaacttttaaagtaatgcaattctttactcggtgatactatcctgtgcatatcctttcc 368

            
Query: 602 t 602
           |
Sbjct: 367 t 367


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1003
Length adjustment: 10
Effective length of query: 592
Effective length of database: 993
Effective search space:   587856
Effective search space used:   587856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)