Query= MSMg01no415_i23.b1 MSMg01no415_i23.b1 CHROMAT_FILE:
MSMg01no415_i23.b1 PHD_FILE: MSMg01no415_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:59 2005
(286 letters)
>mm_chr17_26418470_26419153
Length = 684
Score = 514 bits (266), Expect = e-150
Identities = 279/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 gcatcgcggaggtcggaggagaaggaggctggcgagatctgaatctggctcaggcgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcgcggaggtcggaggagaaggaggctggcgagatctgaatctggctcaggcgctgt 260
Query: 61 aaatagtctgacaaatgttcggcaccgcctaaattaccctttatatttgctgatacaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatagtctgacaaatgttcggcaccgcctaaattaccctttatatttgctgatacaact 320
Query: 121 catcttttgtagttaaaatttctattgtttggtcctagctgtgagtttctagagttgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcttttgtagttaaaatttctattgtttggtcctagctgtgagtttctagagttgttc 380
Query: 181 agagctgcttctgtgtttggggttacattgtataggaacaaataaatctggcggctgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagctgcttctgtgtttggggttacattgtataggaacaaataaatctggcggctgcct 440
Query: 241 cctgacagctgtgtttttgtatctgctgtnncctctagagtaga 284
||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 441 cctgacagctgtgttggggtatctgctgt--cctctagagtaga 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 684
Length adjustment: 9
Effective length of query: 277
Effective length of database: 675
Effective search space: 186975
Effective search space used: 186975
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_i23.g1 MSMg01no415_i23.g1 CHROMAT_FILE:
MSMg01no415_i23.g1 PHD_FILE: MSMg01no415_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:59 2005
(470 letters)
>mm_chr17_26573766_26574635
Length = 870
Score = 862 bits (446), Expect = 0.0
Identities = 464/474 (97%), Gaps = 8/474 (1%)
Strand = Plus / Minus
Query: 1 tagactttgcaaagtcctctggggttcctgtgttgggggctagattgagaggtactgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tagactttgcaaagtcctctggggttcctgtgttgggggctagattgagaggtactgcag 611
Query: 61 gttctgaggggcagggatctgggtgcccattggcagtgctggtccccaagggtaaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gttctgaggggcagggatctgggtgcccattggcagtgctggtccccaagggtaaatgct 551
Query: 121 ggcctgaagaattactcagtcctgtgagaataggtttttaggaagagagcaggcctgacc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggcctgaagagttactcagtcctgtgagaataggtttttaggaagagagcaggcctgacc 491
Query: 181 accgactctccggcttctagtttcactatgctatgtctcctgcttgttcctcctgtcgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 accgactctccggcttctagtttcactatgctatgtctcctgcttgttcctcctgtcgcc 431
Query: 241 ccaata----ttttctcccagaggccctgcagccggcgcatcatgcttttctggtgaagc 296
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 430 ccaatagcag----ctcccagaggccctgcagccggcgcatcatgcttttctgatgaagc 375
Query: 297 ctcgggtatttggttgcagtagacagaagcgaggctaacatggaagttcagagatggcat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctcgggtatttggttgcagtagacagaagcgaggctaacatggaagttcagagatggcat 315
Query: 357 ccatgtcctgctcatgtcctcagatcaggggacattgtcttgctttatgacagcttgttc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccatgtcctgctcatgtcctcagatcaggggacattgtcttgctttatgacagcttgttc 255
Query: 417 aagtctacagctgtttatacatatgcacacataactatcttcagattatgttac 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aagtctacagctgtttatacatatgcacacataactatcttcagattatgttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
