Query= MSMg01no418_j18.b1 MSMg01no418_j18.b1 CHROMAT_FILE:
MSMg01no418_j18.b1 PHD_FILE: MSMg01no418_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:51 2005
(515 letters)
>mm_chr17_64052325_64053239
Length = 915
Score = 661 bits (342), Expect = 0.0
Identities = 369/382 (96%), Gaps = 8/382 (2%)
Strand = Plus / Minus
Query: 1 tattcatttccttaacctctccaatgtcatatttatgtctcttttcctttacactaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 382 tattcatttccttaacctctccaatgtcatatttatgtctcttttcctttagactaaaag 323
Query: 61 ttctggtttagggtgcatgtgtgcagatctgttttgatgaaaatggttttagagtttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttctggtttagggtgcatgtgtgcagatctgttttgatgaaaatggttttagagtttcag 263
Query: 121 gatcagtgtcactcttaacagcaaacaaaatgatggataaaatttaagatttcttggcat 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 262 gatcagtgtcactcttaacagcaaacaaaatgatggataaaagttaagatttcttggcat 203
Query: 181 gttttctttcttgttttctttctttctttctttctttctttctttctttctttctttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gttttctttcttgttttctttctttctttctttctttctttctttctttctttctttctt 143
Query: 241 t------ctttctttctt--ttccttccttccttccttccttccttctttccctcctgtc 292
| ||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 142 ttccttccttccttccttccttccttccttccttccttccttccttccttccctcctgtc 83
Query: 293 tctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctctcgttt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctctcgttt 23
Query: 353 gtttgtttgcattttggtcacc 374
||||||||||||||||||||||
Sbjct: 22 gtttgtttgcattttggtcacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_j18.g1 MSMg01no418_j18.g1 CHROMAT_FILE:
MSMg01no418_j18.g1 PHD_FILE: MSMg01no418_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:51 2005
(352 letters)
>mm_chr17_63892505_63893258
Length = 754
Score = 650 bits (336), Expect = 0.0
Identities = 349/354 (98%), Gaps = 2/354 (0%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgaaccccatttttaatggggttatttgattttctggagtccaccttt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagctccgaaccccatttttaatggggttatttgattttctggagtccaccttt 260
Query: 61 ttgagttctttatatatattggatattactcccctatctgatttaggattggatgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagttctttatatatattggatattactcccctatctgatttaggattggatgttttt 320
Query: 121 aatagtgag--ttttttttttaattcctcatcacaaatatgcaatattgctgggggaagg 178
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagtgaggtttttttttttaattcctcatcacaaatatgcaatattgctgggggaagg 380
Query: 179 attcagcccctttgacctgcttcttcccgggcccttatccctttgatggagcttgtccag 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 attcagcccctttgacctgcttcttcctgggcccttatccctttgatggagcttgtccag 440
Query: 239 caggaatgctctgtcttggcttccagactgctgtttgggctgtgtagtttcatattttgc 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 caggaatgctctgtcttggcttccagactgctgtttgggctatgtagtttcatattttgc 500
Query: 299 tcatgattacgtgcatcttgtgtttccccgaaaaccaagtgacttttaacattt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatgattacgtgcatcttgtgtttccccgaaaaccaagtgacttttaacattt 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 754
Length adjustment: 9
Effective length of query: 343
Effective length of database: 745
Effective search space: 255535
Effective search space used: 255535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
