Query= MSMg01no421_g13.b1 MSMg01no421_g13.b1 CHROMAT_FILE:
MSMg01no421_g13.b1 PHD_FILE: MSMg01no421_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:34 2005
(542 letters)
>mm_chr17_15076844_15077785
Length = 942
Score = 503 bits (260), Expect = e-146
Identities = 263/264 (99%)
Strand = Plus / Plus
Query: 279 ctcatgctggacttctgacagacttgatcatgtagaagtcttatactgacaaaaacttta 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctcatgctggacttctgacagacttgatcatgtagaagtcttatactgacaaaaacttta 538
Query: 339 aaagtaaaagcagaaagcaaacaaacagcgctcaggactcagaatttgacattatgaaaa 398
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 539 aaagtaaaagcagaaagcaaacaaacagcgcgcaggactcagaatttgacattatgaaaa 598
Query: 399 cattcaccatcattagtcagctcccctgtagtcaggtacaaccatgtggctgtgctctag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cattcaccatcattagtcagctcccctgtagtcaggtacaaccatgtggctgtgctctag 658
Query: 459 cctgggcagcaggaggaagcatgagtaacagatctcactttataaccctggccctcggaa 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctgggcagcaggaggaagcatgagtaacagatctcactttataaccctggccctcggaa 718
Query: 519 gtctcacctacataactctcaaca 542
||||||||||||||||||||||||
Sbjct: 719 gtctcacctacataactctcaaca 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_g13.g1 MSMg01no421_g13.g1 CHROMAT_FILE:
MSMg01no421_g13.g1 PHD_FILE: MSMg01no421_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:34 2005
(247 letters)
>mm_chr17_15254279_15254925
Length = 647
Score = 426 bits (220), Expect = e-124
Identities = 236/246 (95%), Gaps = 8/246 (3%)
Strand = Plus / Minus
Query: 1 ttttcatcctaccaagaaaataaatgtatattgttttctgaaatggttaccagcatatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttttcatcctaccaagaaaataaatgtatattgttttctgaaatggttaccagcatatag 273
Query: 61 atgggcttctaaaaaaaaaaaaaacagtttggaagacctgcataggaggggtagcatgtg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgggcttctaaaaaaaaaaaaaccagtttggaagacctgcataggaggggtagcatgtg 213
Query: 121 gaggttggaggattggaggacaggggacgcccagtatcatgtggcatctgagtaagggtc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 212 gagg--------ttggaggacaggggacgcccagtatcatgtggcatctgagtaagggcc 161
Query: 181 tggaaaggtctccttgtatttagtttccccatctgtaaaatgggaagcaaagccacctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tggaaaggtctccttgtatttagtttccccatctgtaaaatgggaagcaaagccacctgc 101
Query: 241 ttggta 246
||||||
Sbjct: 100 ttggta 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
