Query= MSMg01no422_g06.b1 MSMg01no422_g06.b1 CHROMAT_FILE:
MSMg01no422_g06.b1 PHD_FILE: MSMg01no422_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:50 2005
(475 letters)
>mm_chr17_45012054_45012928
Length = 875
Score = 864 bits (447), Expect = 0.0
Identities = 464/473 (98%), Gaps = 7/473 (1%)
Strand = Plus / Plus
Query: 5 gaattcttgattattc----cattttatttaaataataaattagtataatttagagcaaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttgatta---agaacattttatttaaataataaattagtataatttagagcaaa 260
Query: 61 acaaaaagaaaatttatttaattatctctgggatgccaacttgaattgatactaccatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaaaagaaaatttatttaattatctctgggatgccaacttgaattgatactaccatgc 320
Query: 121 ttcttataaaatgacttaaactttattcattaaaaaaatttttttcaaagtatgtttgtg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ttcttataaaatgacttaaactttattcattaaaaaattttttttcaaagtatgtttgtg 380
Query: 181 tgttttgtttgtttgtgtgagtgcttgtgcccctccacagaggtcagagatatcacatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttgtttgtttgtgtgagtgcttgtgcccctccacagaggtcagagatatcacatct 440
Query: 241 tcttgaagctagagctccatgcaggttgtgattggctcattgtgggtgcagggaaccata 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 tcttgaagctagagctccatgcaggttgtgattggctcagtgtgggtgcagggaaccata 500
Query: 301 ttcaggtcctctggaagagcagcaagttttcctaactactacaccatctctcccactcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaggtcctctggaagagcagcaagttttcctaactactacaccatctctcccactcct 560
Query: 361 caatctcattaaattttttaatgttatccagatttgtttacatcttcccattctaaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatctcattaaattttttaatgttatccagatttgtttacatcttcccattctaaagca 620
Query: 421 ttgttcccacagtcatatttttgttttttcatagtgtttgcttagataaatca 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgttcccacagtcatatttttgttttttcatagtgtttgcttagataaatca 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_g06.g1 MSMg01no422_g06.g1 CHROMAT_FILE:
MSMg01no422_g06.g1 PHD_FILE: MSMg01no422_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:50 2005
(247 letters)
>mm_chr17_45173985_45174631
Length = 647
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 cataactagttaggataaagctgaaggaagagatgttttacatacatttgtattaattca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 375 cataactagttaggataaagctgaaggaacagatgttttacatacatttgtattaattca 316
Query: 61 ctaagaatttcatacatgcaaacaatatatttagttcacttccaactcttctaactcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctaagaatttcatacatgcaaacaatatatttagttcacttccaactcttctaactcctc 256
Query: 121 ctagatctactccctccttcctctccccgtctttgttttattaaccccagcctcctggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctagatctactccctccttcctctccccgtctttgttttattaaccccagcctcctggga 196
Query: 181 gtggggccacccactggagcatgtttaacctattgggaccataaccttaaataaaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtggggccacccactggagcatgtttaacctattgggaccataaccttaaataaaactgt 136
Query: 241 ttctc 245
|||||
Sbjct: 135 ttctc 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
