Query= MSMg01no424_e07.b1 MSMg01no424_e07.b1 CHROMAT_FILE:
MSMg01no424_e07.b1 PHD_FILE: MSMg01no424_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:11 2005
(584 letters)
>mm_chr17_72261686_72262668
Length = 983
Score = 1029 bits (532), Expect = 0.0
Identities = 571/584 (97%), Gaps = 1/584 (0%)
Strand = Plus / Minus
Query: 1 cacccccaccacaacttcagatcgccaactgtcccctagctctgaggacctgatgaccca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 783 cacccccaccacaacttcagatagccaactgtcccctagctctgaggacctgatgaccca 724
Query: 61 cagtctttacattcaaatttgcagtggcccatgcatattcattccatcatccctctttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cagtctttacattcaaatttgcagtggcccatgcatattcattccatcatccctctttgc 664
Query: 121 tttgcaccgccatgtgagtttggaaaagaagacaaagctcttcttccattagagacgagg 180
|||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||
Sbjct: 663 tttggaccgccatgtgaatttggaaaagaagacaaagctcttcttctgttagagacaagg 604
Query: 181 ctggatctctgtagtgggcacacaaactctggtcttggagcccaacagctccctccgctt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctgggtctctgtagtgggcacacaaactctggtcttggagcccaacagctccctccgctt 544
Query: 241 tgcctcaaggaggatcagccattctggtggccgactctctttgcataactgtgtgcattt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgcctcaaggaggagcagccattctggtggccgactctctttgcataactgtgtgcattt 484
Query: 301 cccagtctcttcataaactctggcagggcctggagcccatctcagatcctctcttctcca 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cccagtctcttcgtaaactctggcagggcctggagcccatctcagatcctctcttctcca 424
Query: 361 tgaagcctgatgccattcccagcactgataagctcaagcaggtccctgagtagccagccg 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 423 tgaagcctgatgccattcccagcactgataggctcaagcaggtccctgagtagccagccg 364
Query: 421 gaccacgaacaccagatagcatttgcgttccttggacaactcaggttcttgtctgttgca 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaccatgaacaccagatagcatttgcgttccttggacaactcaggttcttgtctgttgca 304
Query: 481 ttagaaaaaaagccagtctctagggttgtccctgcagaaaggtcctggactgcaccttgg 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttag-aaaaaagccagtctctagggttgtccctgcagaaaggtcctggactgcaccttgg 245
Query: 541 gagagactgaggagtctcccatgttcacaacatgttatagaagc 584
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 244 gagagactgaggagtctcccatgttcagaacatgttatagaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 983
Length adjustment: 10
Effective length of query: 574
Effective length of database: 973
Effective search space: 558502
Effective search space used: 558502
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_e07.g1 MSMg01no424_e07.g1 CHROMAT_FILE:
MSMg01no424_e07.g1 PHD_FILE: MSMg01no424_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:11 2005
(244 letters)
>mm_chr17_72118506_72119149
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 ttccacggagctttgtctcatgaacacacctgaagaagtttcaggcattcagaaaagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccacggagctttgtctcatgaacacacctgaagaagtttcaggcattcagaaaagttg 260
Query: 61 ctgtggagggaggcctgagtggaaatcagggtgattgatctctttggtaacttgacagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtggagggaggcctgagtggaaatcagggtgattgatctctttggtaacttgacagac 320
Query: 121 actttgaaagggttaaagcatccgagcttcttccctgttgtgaaatgaagggcttgtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttgaaagggttaaagcatccgagcttcttccctgttgtgaaatgaagggcttgtaga 380
Query: 181 gcttactagggtcctttgcccgtttggctaagcactaagttcagggtcctaattagtacc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 381 gcttactagggtcctttgcccgtttggctaagcactaaattcagggtcctaattagtgcc 440
Query: 241 tggc 244
||||
Sbjct: 441 tggc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
