Query= MSMg01no429_k11.b1 MSMg01no429_k11.b1 CHROMAT_FILE:
MSMg01no429_k11.b1 PHD_FILE: MSMg01no429_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(524 letters)
>mm_chr17_64346895_64347813
Length = 919
Score = 944 bits (488), Expect = 0.0
Identities = 510/520 (98%), Gaps = 5/520 (0%)
Strand = Plus / Minus
Query: 5 gaattctttactttgttctactaaacagtgccattgaatatagttataggaaaagtttcc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gaattctttacagtgttctactaaacagtgccattgaatatagttataggaaaagtttcc 660
Query: 65 acgtgataatgcttaataaaaaattaaaactatgtgtaagctgctctaagtcaccctcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 acgtgataatgcttaataaaaaattaaaactatgtgtaagctgctctaagtcaccctcca 600
Query: 125 aacacaacgtaacataattcctctcagaacatggcctttaagctttccacacgtagatat 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aacacaacataacataattcctctcagaacatggcctttaagctttccacacgtagatat 540
Query: 185 ttcaacttatgaaagtaaaatactaaaattctgttttatagattattttcccactttaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcaacttatgaaagtaaaatactaaaattctgttttatagattattttcccactt---- 484
Query: 245 attttatggtccttccgtcatctatgtacgtgcacacagtgaccatgaacttgtacacac 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 483 -ttttatggtccttccgtcatctatgtacgtgcacacaatgaccatgaacttgtacacac 425
Query: 305 gagtgacagacaggagtcaatgttatctgtgtcctcagcctctcttctctgtcttttcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gagtgacagacaggagtcaatgttatctgtgtcctcagcctctcttctctgtcttttcat 365
Query: 365 tccatctgtattgccttctaaagtgggccaggcactgtatctccactcacaagcctcgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tccatctgtattgccttctaaagtgggccaggcactgtatctccactcacaagcctcgct 305
Query: 425 aaccgtaagacctacaaacgcttaggaacaggccatgtggggcattcctcccatcacatt 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaccgtaagacctacaaatgcttaggaacaggccatgtggggcattcctcccatcacatt 245
Query: 485 atctcagctcacattacacccaggactagggcaaggagaa 524
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atctcagctcacattacacccaggactagggcaaggagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 919
Length adjustment: 10
Effective length of query: 514
Effective length of database: 909
Effective search space: 467226
Effective search space used: 467226
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_k11.g1 MSMg01no429_k11.g1 CHROMAT_FILE:
MSMg01no429_k11.g1 PHD_FILE: MSMg01no429_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(240 letters)
>mm_chr17_64214775_64215414
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%)
Strand = Plus / Plus
Query: 1 ttgaatttcattcttagttgccatgtggctctaacttttctgtgaacactttttccgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ttgaatttcattcttagttgccatgtggctctaacttttctgtgaacactttttctgcta 260
Query: 61 gcatcaagtaaaatttcagtttacacagagcaagctgtacatgttacttttatggcagta 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gcatcaagtaaaatttcagtttacacagagcaagctgtacgtgttacttttatggcagta 320
Query: 121 gtacctttgacattgctgtcccatagtaaatactaacagaggagctggaatgatagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacctttgacattgctgtcccatagtaaatactaacagaggagctggaatgatagtaaa 380
Query: 181 aataccgtaaggtccttgtttgttttgaagtagaaatagtgaaactaattagtaacggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataccgtaaggtccttgtttgttttgaagtagaaatagtgaaactaattagtaacggga 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
