Query= MSMg01no429_l17.b1 MSMg01no429_l17.b1 CHROMAT_FILE:
MSMg01no429_l17.b1 PHD_FILE: MSMg01no429_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:18 2005
(558 letters)
>mm_chr17_72644131_72645086
Length = 956
Score = 930 bits (481), Expect = 0.0
Identities = 536/555 (96%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaggatgtttgttgtaagtgttgacacttgagttggaattgacagaatcttc 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctaggaggtttgttgtaagtgttgacacttgagttggaattgacagaatcttc 263
Query: 64 ttttgggatcgggggaggcatcttagtatggggacagacatcaataaacaaggagagaag 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 ttttgggatcgggggaggcatcttagtatggggacagacatcaatgaacaaggagagaag 323
Query: 124 agagcaaggattgttggtctttttgcttgtcaattaaggaattaacctgagcttttaaac 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agagaaaggattgttggtctttttgcttgtcaattaaggaattaacctgagcttttaaac 383
Query: 184 atctatggtgatcatgctgtcatgaaggagactgtataattcaggcaacaagggtatgaa 243
|||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||| ||||
Sbjct: 384 atctatggtgatcacgctatcatgaaggaaactgtataattcaggtaacaagggtgtgaa 443
Query: 244 tataaggtgaggaagttgtgtgatcctcttcttgcctgcatggccattctagtcacgtgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tataaggtgaggaagttgtgtgatcctcttcttgcctgcatggccattctagtcacgtgc 503
Query: 304 cttctctttgtataaatatctctgtgagaagagcaagtcttcatgaggtacctgaaaaga 363
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 504 cttctctttgtataaatatctctgtgaaaagagcaagtcttcatgaggtacctgaaaata 563
Query: 364 gtatgctaagggaatacatcaggcttcagaatcatgagaccttgcgatgatacacacgtc 423
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 564 gtatgctaagggaatacatcaggcttcagaatcatgagaccttgcaatcatacacacgtc 623
Query: 424 taatacttgcatagctataggccccgagaaagatcaaatctttcctcaatttcccatttt 483
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 taatacctgcatggctataggccctgagaaagatcaaatctttcctcaatttcccatttt 683
Query: 484 atcacattgaaattagccttcttacaacatataagatggtgtgatggttacatttcaatg 543
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 684 atcacattgaaattagccttcttacaacata--agatggtgtgatggttacatttcaatg 741
Query: 544 tgcatgtcccaatgt 558
|||| |||||||||
Sbjct: 742 tgcacatcccaatgt 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 956
Length adjustment: 10
Effective length of query: 548
Effective length of database: 946
Effective search space: 518408
Effective search space used: 518408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_l17.g1 MSMg01no429_l17.g1 CHROMAT_FILE:
MSMg01no429_l17.g1 PHD_FILE: MSMg01no429_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:18 2005
(418 letters)
>mm_chr17_72846378_72847195
Length = 818
Score = 762 bits (394), Expect = 0.0
Identities = 412/418 (98%)
Strand = Plus / Minus
Query: 1 aaacacaacttgaccacaatgccttaccctagatttcatctctgcaatgtgttgtgcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaacacaacttgaccacaatgccttaccctagatttcatctctgcaatgtgttgtgcagc 559
Query: 61 cctgaagaaaaaaggagagaagcaccaatattacagaccctagaaaggaccagatcctgg 120
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 558 cctgaagaaaaaaggagagaagcaccaatattacgggccctagaaaggaccagatcctgg 499
Query: 121 aatagagatgcagagagaaaagagatgctttgactcaaagtattctattcagctcagcca 180
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 498 aatagagatgcagagagaaaagagatgctttgactcaaagtactctcttcagctcagcca 439
Query: 181 gataggcttgctgtcatgatgcttctgtgccttggacttcccctccttgatatgaaatct 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 438 gataggcttgctgtcatgatgcttttgtgccttggacttcccctccttgatatgaaatct 379
Query: 241 gtgtgaacaggacacttctgatatgaagcaaagtgacttctcaaagttactcacaccctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtgtgaacaggacacttctgatatgaagcaaagtgacttctcaaagttactcacaccctg 319
Query: 301 ctcaagaattatacgccccagagcttgaaggacagggttgaactattacatttggactac 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctcaagaattatacaccccagagcttgaaggacagggttgaactattacatttggactac 259
Query: 361 tcctttccccctgagtaacaaaatcaacctcatgtgatccaatggtttaaaatgtgtc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcctttccccctgagtaacaaaatcaacctcatgtgatccaatggtttaaaatgtgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
