Query= MSMg01no432_p08.b1 MSMg01no432_p08.b1 CHROMAT_FILE:
MSMg01no432_p08.b1 PHD_FILE: MSMg01no432_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:53 2005
(388 letters)
>mm_chr17_43680763_43681550
Length = 788
Score = 607 bits (314), Expect = e-178
Identities = 368/386 (95%), Gaps = 3/386 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgcatctcccttttctaatgcgtggaagcatccagagatgctgtggggacagc 63
|||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctgcatcttgtttttctaatgcctggaagcatccagagatgctgtgggtacagc 263
Query: 64 agcaatttgcacattcagtttggactggatgactggatccagcatcaatgttcgatggaa 123
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 264 agcaatttgcacattcagtttgcactggatgactggatccagcatcaatgttcaatggaa 323
Query: 124 attaaaagctattgccacgtagggttatgagtcccaca-tctgctccgccacagggcaca 182
||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||
Sbjct: 324 attaaaagctattgccatgtagggttatgagtccca-agtctgctccgccacagggcaca 382
Query: 183 gcccacacgaggaagcagggcatgggaaatgttgactgtgctgggcaggtagagacacag 242
||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 383 gcccacatgaggaagcagggcatgggaaatgttgactgtgctgggcagataaagacacag 442
Query: 243 cctgggggtggggaagcgcactatgaggcatggtacagctggagctggcttggaggtccc 302
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 cctgggg-tggggaagcgcactatgaggcatgggacagctggagctggcttggaggtccc 501
Query: 303 caggcgtgagaggaggccagggctgtctggttctcaggctcttggacacccaggcactgt 362
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 caggcatgagaggaggccagggctgtctggttttcaggctcttggacacccaggcactgt 561
Query: 363 tgggagccacagaagagctggtaacg 388
|||||||||||||||||||| |||||
Sbjct: 562 tgggagccacagaagagctgataacg 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_p08.g1 MSMg01no432_p08.g1 CHROMAT_FILE:
MSMg01no432_p08.g1 PHD_FILE: MSMg01no432_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:54 2005
(452 letters)
>mm_chr17_43860181_43861032
Length = 852
Score = 801 bits (414), Expect = 0.0
Identities = 429/434 (98%)
Strand = Plus / Minus
Query: 19 gaggagatcactggagttgataagatgtctcagcagctaagagaacttcttgttcatgaa 78
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 852 gaggagatcactggagttgataagatgtctcagcagctaatagaacttcttgctcatgaa 793
Query: 79 gagggcctgggtttggttcacagcactcacaactacccatgacttcaattccaggcagac 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gagggcctgggtttggttcacagcactcacaactacccatgacttcaattccaggcagac 733
Query: 139 tgaacattctcttctggcatgaggtattcatatagcacatatagatacatgcaggcaaat 198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 732 tgaacattctcttctggcatgaggtattcatatagcacatatagattcatgcaggcaaat 673
Query: 199 acccatacacatacaataaataaatctttttaaagcactggatatcattatgttatgtaa 258
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 672 acccatacacatacaataaataaatctttttaaaggactggatatcattatgctatgtaa 613
Query: 259 aataatgcagactgtaaaagaaatatatggcttgttttctcttatgcaaaatctacattt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aataatgcagactgtaaaagaaatatatggcttgttttctcttatgcaaaatctacattt 553
Query: 319 aagtgtatctatgagcatgtatatatgctatgacagtagataggaactaggagagggaag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagtgtatctatgagcatgtatatatgctatgacagtagataggaactaggagagggaag 493
Query: 379 atagactttagaaggagaacaagagagagtagtggaatgtaattaatgcatggtaagggg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atagactttagaaggagaacaagagagagtagtggaatgtaattaatgcatggtaagggg 433
Query: 439 tcagcaccagaaga 452
||||||||||||||
Sbjct: 432 tcagcaccagaaga 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
