CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTAAGTTTTATCATCCTTATTTTTTTTTCTGTTAAATCTTTGT
TGACACCACATGGTGTCATAGGCTTGATTTAGCTGTGGGGATATCTAAGA
TTTATGGCTTCTGATAACACTGACCGTTTAAGTCATAGTGGTCAGGAAGT
GAGTAGATTTCCCCTTGGTTGACATTTGACTAGTGTTTGGTTGTTTTTGT
TGTGGTGGTATCACTGAAGTAATGGCTAATAAAGAGAAATATCACAAAGG
TAAAGTATTATTTTATTTACAATGTATCTATGAAGTCATATGATCAACAT
TATTTACTGCTACATTGTCTAATTTTATGTCAACTTTGCACAAGACAGAG
TCATTTCAGAGGAGAGATCCTAAATTGAGAAAATGCCTCCATAGATTTGG
CTCTAGGTAAACCTATAGGGCCTTTTCTTAATTGTGATCAATATGAGAAG
GCCTAGCCCATTCTGTGTGGAGCCACTCCTAGGCCAGTTCTCTTCAATGA
TATAAGAAAGCAGATTAAGCAAGCCACAGAGAGCAAGGCAGTACGTGGCT
CCCCTCCATATCTTCCGCATCTGCTTTTGCCTCTACGTAGGAATGTTCTT
GATCTCCTGACCTTACTTCTTTTGATAATGGGTCTGTATGTGGTGTGTAA
ATGTTGTGGGAATAACCCTTTCCTCCTCAATTTCATATGATCATGGTGCT
TTGCCACCTCA

CCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTGCGGTATTCACAGGGGGCATCAGAGGAGGAGGAGGA
GGAGCAGGAGAAAGAGGAGGAGGGAAGAGTGTTTGCTGCTGACAAACAGC
TGCTTGATAGCTGATCTTCATAGCCTCTGTCTTACCCATGCTTTCTGATC
TTTTTCATTTCCTGTAAACGTACACTCATGATTCTGGAGAGGTAATTTTC
TCATGCTTTTGTGGTACAAAGACGATTCCGTTATCAGACTTTTATTGAGT
TACCAGAAATGTATTTTTTTGTTTTTTAGAGGTCATATCACATAACAGGT
TGCTTTTGTACTGTCTACCTCGACTCCTTTCTCCTTTATATTCTCTTGTT
TCCTTTATTTTCCCTCCCATCGGCTCTCTGCTACAAACATGCAGAGCTAT
CTATCGTTCACCCTCAATCGTAACTATTCTTCTGCTCGGCCCATATGATA
CGCCATCTCCCAGCTGCTCTCTCCTGACTCCCCCTGTGCTCTTATTTATG
CAGTCCTGCGCCCCTCTCACCTCCCCACTCCCTGTCTTTGTTCCCCTTCC
ACCCTGTTTTCTTCTTTCCCCTCCCTATCCCCCTCCTCGCCTCTATTCCC
CTCCCCTCCTCCTCTTCCCTTTTCCTCTCCCCTTTCTCTCCCCCTCTCTT
TTCTTCCTCCCCTTTCATTCCTCCCCTCTTCCCTCCCTTTTTTCTTTTCC
CCCGCCCCTTCCCCATACTTCCTCCTCTCTTTCCTTCTCCCTCTTN

Query= MSMg01no436_m24.b1 MSMg01no436_m24.b1 CHROMAT_FILE:
MSMg01no436_m24.b1 PHD_FILE: MSMg01no436_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:59 2005
         (592 letters)



>mm_chr17_94251790_94252780
          Length = 991

 Score = 1091 bits (564), Expect = 0.0
 Identities = 582/588 (98%), Gaps = 1/588 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttaagttttatcatccttatttttttttctgttaaatctttgttgacaccaca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaagttttatcatccttatttttttttctgttaaatctttgttgacaccaca 264

                                                                       
Query: 65  tggtgtcataggcttgatttagctgtggggatatctaagatttatggcttctgataacac 124
           | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 tagtgtcataggcttgatttagctgtggggatatctaagatttacggcttctgataacac 324

                                                                       
Query: 125 tgaccgtttaagtcatagtggtcaggaagtgagtagatttccccttggttgacatttgac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaccgtttaagtcatagtggtcaggaagtgagtagatttccccttggttgacatttgac 384

                                                                       
Query: 185 tagtgtttggttgtttttgttgtggtggtatcactgaagtaatggctaataaagagaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtgtttggttgtttttgttgtggtggtatcactgaagtaatggctaataaagagaaat 444

                                                                       
Query: 245 atcacaaaggtaaagtattattttatttacaatgtatctatgaagtcatatgatcaacat 304
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 atcacaaaggtaaagtattattttatttacaatgtatc-atgaagtcatatgatcaacat 503

                                                                       
Query: 305 tatttactgctacattgtctaattttatgtcaactttgcacaagacagagtcatttcaga 364
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatttactgctacgttgtctaattttatgtcaactttgcacaagacagagtcatttcaga 563

                                                                       
Query: 365 ggagagatcctaaattgagaaaatgcctccatagatttggctctaggtaaacctataggg 424
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 ggagagatcctaaattgagaaaatgcctccatagacttggctctaggtaaacctataggg 623

                                                                       
Query: 425 ccttttcttaattgtgatcaatatgagaaggcctagcccattctgtgtggagccactcct 484
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 624 ccttttcttaattgtgatcaatatgagaaggcctagctcattctgtgtggagccactcct 683

                                                                       
Query: 485 aggccagttctcttcaatgatataagaaagcagattaagcaagccacagagagcaaggca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aggccagttctcttcaatgatataagaaagcagattaagcaagccacagagagcaaggca 743

                                                           
Query: 545 gtacgtggctcccctccatatcttccgcatctgcttttgcctctacgt 592
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtacgtggctcccctccatatcttccgcatctgcttttgcctctacgt 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 991
Length adjustment: 10
Effective length of query: 582
Effective length of database: 981
Effective search space:   570942
Effective search space used:   570942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)