Query= MSMg01no438_a22.b1 MSMg01no438_a22.b1 CHROMAT_FILE:
MSMg01no438_a22.b1 PHD_FILE: MSMg01no438_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:40 2005
(555 letters)
>mm_chr17_55018498_55019452
Length = 955
Score = 1044 bits (540), Expect = 0.0
Identities = 548/551 (99%)
Strand = Plus / Minus
Query: 5 gaattcagcccaagcttcatagtactaaaaatcaattttactaccaacataaaaatcaat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaattcagcccaagcatcatagtactaaaaatcaattttactaccaacataaaaatcaat 696
Query: 65 aataaaattgattcttaagggtactttgccagatgatttagcatcaattagggggaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aataaaattgattcttaagggtactttgccagatgatttagcatcaattagggggaatga 636
Query: 125 taaaatgagcctttgagagaacatggtcttcatacatctttattttgaatgacaagcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 taaaatgagcctttgagagaacatggtcttcatacatctttattttgaatgacaagcttt 576
Query: 185 gaagttttacaggaaaatattttgtcagttttaaaacacatggtttgtgagtatttgtca 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 575 gaagttttacaggaaaatattttgtcagatttaaaacacatggtttgtgagtatttgtca 516
Query: 245 tagaatttctacacaaacacaaattctaatgctaagtctgattggataatacaacctaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tagaatttctacacaaacacaaattctaatgctaagtctgattggataatacaacctaac 456
Query: 305 tatagtgagataatgacgattccttataatatgcacacattctgaagctggaattttaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tatagtgagataatgacgattccttataatatgcacacattctgaagctggaattttaat 396
Query: 365 gttctaatttgaaaaaaaagtgttccactgatattattaaacacgttagatgtagaaata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gttctaatttgaaaaaaaagtgttccactgatattattaaacacgttagatgtagaaata 336
Query: 425 ctgttggatcttcaacatatctcctaaataccatcatctgaaccattataaaaagtagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgttggatcttcaacatatctcctaaataccatcatctgaaccattataaaaagtagca 276
Query: 485 taggggaatttgatgcaaacagaanaggaagtgatgtggaaatagaagataagaaggcta 544
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 275 taggggaatttgatgcaaacagaaaaggaagtgatgtggaaatagaagataagaaggcta 216
Query: 545 tagtcataaac 555
|||||||||||
Sbjct: 215 tagtcataaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_a22.g1 MSMg01no438_a22.g1 CHROMAT_FILE:
MSMg01no438_a22.g1 PHD_FILE: MSMg01no438_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:40 2005
(450 letters)
>mm_chr17_54818561_54819410
Length = 850
Score = 750 bits (388), Expect = 0.0
Identities = 426/450 (94%), Gaps = 18/450 (4%)
Strand = Plus / Plus
Query: 1 agaacctaaatactgtggtgtcagattctcctgtgtcctagggcaatactatatttaact 60
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 201 agaacctaaatactgtggtgtcaggttctcctgtgtcctagggcaatagtatatctaact 260
Query: 61 attctcttagagatcattctgattctaattcagtactggagccatgctttttgcacatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 attctcttagagatcattctgattctaattcagtactggagccatgctttttgcacaact 320
Query: 121 ctgaaaacaaaacaaaacaaaacaaaaacaaacaaaaaacaaaacaaaacaaaacaaaaa 180
||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 321 ctgaaaacaaaacaaaacaaaacaaaaacaaac------------------aaacaaaca 362
Query: 181 aaaaaacccagcagcttttgttaccatacaaacagagcaaagaacatagaaacattttac 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaaaaacccaacagcttttgttaccatacaaacagagcaaagaacatagaaacattttac 422
Query: 241 aaaattcagtgtcctctgatatgtcacccagaatgtgacctgccaaactctcaccaccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaattcagtgtcctctgatatgtcacccagaatgtgacctgccaaactctcaccaccgt 482
Query: 301 acctcttctcccctagtatgcataagtgataatctccttggcaaccattcctctctgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acctcttctcccctagtatgcataagtgataatctccttggcaaccattcctctctgctg 542
Query: 361 ggtcttggacatcgtgaaacgtctctatcttactgaaaatatattgcgcatatacttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtcttggacatcgtgaaacgtctctatcttactgaaaatatattgcgcatatacttgag 602
Query: 421 ttttatagcctatatgctgacaacccagtg 450
||||||||||||||||||||||||||||||
Sbjct: 603 ttttatagcctatatgctgacaacccagtg 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
