Query= MSMg01no438_b20.b1 MSMg01no438_b20.b1 CHROMAT_FILE:
MSMg01no438_b20.b1 PHD_FILE: MSMg01no438_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:45 2005
(530 letters)
>mm_chr17_8343056_8343985
Length = 930
Score = 1002 bits (518), Expect = 0.0
Identities = 524/526 (99%)
Strand = Plus / Minus
Query: 5 gaattcatagctggtgccataaagaaggaaccatacacgtgtatgcaatcaaaccaaggt 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gaattcatagctggtgggataaagaaggaaccatacacgtgtatgcaatcaaaccaaggt 671
Query: 65 agtttccaccaggaagcctcaactctattgtcccaactacaaggtccccagcctctgtcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agtttccaccaggaagcctcaactctattgtcccaactacaaggtccccagcctctgtcc 611
Query: 125 taggagagtgaagcaacatgggctcttcctggggcctgggcataatggctcctgacacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 taggagagtgaagcaacatgggctcttcctggggcctgggcataatggctcctgacacca 551
Query: 185 ttactgaccctttctctgtgaactacatggcaggctaccaagatggctgctctcctgatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttactgaccctttctctgtgaactacatggcaggctaccaagatggctgctctcctgatt 491
Query: 245 gcagaggtggaaagctggctgggaagaagccagttagctagcttgctttgttcacagtgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcagaggtggaaagctggctgggaagaagccagttagctagcttgctttgttcacagtgt 431
Query: 305 tcactgctgggaaaccgtgagctgaagcccaggttcttcctcttagctgggatgcaccct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcactgctgggaaaccgtgagctgaagcccaggttcttcctcttagctgggatgcaccct 371
Query: 365 cagctttaaagcctcatgcagtcctggtgccaaatcttgctcatcttgaccctttcatcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagctttaaagcctcatgcagtcctggtgccaaatcttgctcatcttgaccctttcatcc 311
Query: 425 agcagtgtgcactttgaacccagctgggatgctcccgccttgctctggctggccaccgcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agcagtgtgcactttgaacccagctgggatgctcccgccttgctctggctggccaccgcc 251
Query: 485 tccatattcccagggcctgttttcctgagaaccccccaagtatcgg 530
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccatattcccagggcctgttttcctgagaaccccccaagtatcgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_b20.g1 MSMg01no438_b20.g1 CHROMAT_FILE:
MSMg01no438_b20.g1 PHD_FILE: MSMg01no438_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:45 2005
(427 letters)
>mm_chr17_7344825_7345651
Length = 827
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%)
Strand = Plus / Minus
Query: 1 tctgtctgcaataacctgatcttgatacaactacaacccagtggtcacaggcagctttac 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tctgtctgcaacaacctgatcttgatacaactacaacccagtggtcacaggcagctttac 722
Query: 61 acagacacactcacatacacgtgcacacacatgcatgcccacacacatgcacaaacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acagacacactcacatacacgtgcacacacatgcatgcccacacacatgcacaaacacac 662
Query: 121 acacatacatgcacatgtacacatacacacacactcgtacagagggaggtgggggagagg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 acacatacatgcacatgtacacatacaaacacactcgtacagagggaggtgggggagagg 602
Query: 181 ctaggaaggctgggagatttacatagttctgaattctctgaccacaggatcagctggtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctaggaaggctgggagatttacatagttctgaattctctgaccacaggatcagctggtcc 542
Query: 241 agccggggctttctcccataaatgaggcacagtacattcctggggcagatgccctgtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agccggggctttctcccataaatgaggcacagtacattcctggggcagatgccctgtggg 482
Query: 301 cagctcttcagtgaagctgcccacacagtcccttctttcatcatcaccttctgggaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagctcttcagtgaagctgcccacacagtcccttctttcatcatcaccttctgggaaacc 422
Query: 361 aagtgagtccctcggttaacctccattttctcactttaaaaactgtacccaaacctttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagtgagtccctcggttaacctccattttctcactttaaaaactgtacccaaacctttaa 362
Query: 421 ttcggga 427
|||||||
Sbjct: 361 ttcggga 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
