TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCTTTAGGTTATTCGTGTATGCACACCAAAGACAGTGAATGAAATGGC
CAAGGTTTAACAGGAATCAATTGCTTTTCATCTACTCCTTACAATGGTAC
TGTGAGCTATAAATACTCCTCATGCATTTTTCTTTTGTTTTCTTTCTCTC
TTGTTTTGCTGCAAATAAGTAACACAAATTTTGAAATAGCCACTTACACA
CATGCACACACCACACAAATACTGAAAGAGACCAAGCAGAGCAGCAAGGG
AATGAAACGGGTGCCTAAAATCTATAATTCAGAACGGAAGTTTTTCCCCT
TGGATAATTAGAAACAGAATCTATTTGTGCACCTTGTTTTTTTCAATCCC
CAATGTGTTCGACTAAAATGGTAATTAGCCGTGTTTCCATTTTGTTTGAG
ACATACTTTATATCATGTGTAGTGCAGTCCCAGTCTCATGGGGAAAATGA
ATAATCAGGAGAATATTTTTCAATGTCTCTTCTCTGTAAAGATTTACTGA
GTTGTCTGTAATGTGTACTGACAGTGTCTGCATTAAAATTAGAAGAAAGT
AGACTTCAGTGTTGTCAAACTTAAGAAAAATCATTCTCCTTTCATTTTCA
TTTTCATAAAATAAATCAAATCCCTATCCTTTTAATATTTTATTAGGGAT
TGTTCAATTTTTGAAGGTCAGAAAAAAGAATGTTTTTTCTAG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACAAATAAAGTCTCTTGTTCTTTCTTCGT
ATGAACATCGTGGCTACTTCATGATAAATTCTGGAGTCTTCAGTTTCATG
GAATGTAATAAATCATCATCCATCGAGCTGTGGAAGCAGAAGAAGGTGCA
CATGCAAGGAGAATTCATCAAGGAATTTGACTTCACTTCACATAGACCAG
CCCAGTTTAGGACCGATTTGCATAGTTCACTATATCATTGAACATTATTG
TTTAGAGGTTTTACAACTTTGCTTGCATGCATTTTTTTTTCTTTTTGCAG
GAGTGGGGGCATGACCGAAAGGAAGAGGGAGGGCTTTAAAAGTTTTCTCC
ATTGGTCGTTTGTTATCCAGCTTCGGTAGTATATGCTTATCATATGCTTT
CTGGTGTCCCAGTTTTGTTTGTTCGCTTGCTTTGTTTTTGCCTTATCTTC
TTTTCTCTTTCCCCTCCTCTTTCCTATTTTTTTTTATTATCTTTTTTTTT
TCCCGACCCCTTTTTCCCTTTTTGATTCTTTTTTTTCCTCCTATTTCTCA
CTGCCTTATTTCTATTTCATTCCTTCATCTTCCTCCTCTTTTTTTTCTTT
TATACCTCTCTATTTCCTCTCTTACTTTTTTTTTCTTACTTTTTTTCCTT
TTTATTCTCTTTTTATCCTATACATTTACTACTTTTCTTTCATCTCTCTT
TCCTTCTTTTTTTCTCTCTTTTTTCTTTN

Query= MSMg01no438_f01.b1 MSMg01no438_f01.b1 CHROMAT_FILE:
MSMg01no438_f01.b1 PHD_FILE: MSMg01no438_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:03 2005
         (508 letters)



>mm_chr17_59466833_59467740
          Length = 908

 Score =  949 bits (491), Expect = 0.0
 Identities = 500/503 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattctttaggttattcgtgtatgcacaccaaagacagtgaatgaaatggccaaggttt 65
           ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaattctttagctcatttgtgtatgcacaccaaagacagtgaatgaaatggccaaggttt 649

                                                                       
Query: 66  aacaggaatcaattgcttttcatctactccttacaatggtactgtgagctataaatactc 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aacaggaatcaattgcttttcatctactccttacaatggtactgtgagctataaatactc 589

                                                                       
Query: 126 ctcatgcatttttcttttgttttctttctctcttgttttgctgcaaataagtaacacaaa 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctcatgcatttttcttttgttttctttctctcttgttttgctgcaaataagtaacacaaa 529

                                                                       
Query: 186 ttttgaaatagccacttacacacatgcacacaccacacaaatactgaaagagaccaagca 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ttttgaaatagccacttacacacatgcacacaccacacaaatactgaaagagaccaagca 469

                                                                       
Query: 246 gagcagcaagggaatgaaacgggtgcctaaaatctataattcagaacggaagtttttccc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gagcagcaagggaatgaaacgggtgcctaaaatctataattcagaacggaagtttttccc 409

                                                                       
Query: 306 cttggataattagaaacagaatctatttgtgcaccttgtttttttcaatccccaatgtgt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cttggataattagaaacagaatctatttgtgcaccttgtttttttcaatccccaatgtgt 349

                                                                       
Query: 366 tcgactaaaatggtaattagccgtgtttccattttgtttgagacatactttatatcatgt 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tcgactaaaatggtaattagccgtgtttccattttgtttgagacatactttatatcatgt 289

                                                                       
Query: 426 gtagtgcagtcccagtctcatggggaaaatgaataatcaggagaatatttttcaatgtct 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtagtgcagtcccagtctcatggggaaaatgaataatcaggagaatatttttcaatgtct 229

                                  
Query: 486 cttctctgtaaagatttactgag 508
           |||||||||||||||||||||||
Sbjct: 228 cttctctgtaaagatttactgag 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no438_f01.g1 MSMg01no438_f01.g1 CHROMAT_FILE:
MSMg01no438_f01.g1 PHD_FILE: MSMg01no438_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:03 2005
         (320 letters)



>mm_chr17_59312445_59313164
          Length = 720

 Score =  549 bits (284), Expect = e-161
 Identities = 311/320 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaaataaagtctcttgttctttcttcgtatgaacatcgtggctacttcatgataaattc 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 acaaataaagtctcttgttctttcttcgtatgaacatcatggctacttcatgataaattc 260

                                                                       
Query: 61  tggagtcttcagtttcatggaatgtaataaatcatcatccatcgagctgtggaagcagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tggagtcttcagtttcatggaatgtaataaatcatcatccatcgaactgtggaagcagaa 320

                                                                       
Query: 121 gaaggtgcacatgcaaggagaattcatcaaggaatttgacttcacttcacatagaccagc 180
           |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 321 gaaggtgcacatgcaaagagaattcatcaaggaatttggcttcactccacatagaccagc 380

                                                                       
Query: 181 ccagtttaggaccgatttgcatagttcactatatcattgaacattattgtttagaggttt 240
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtttagtaccaatttgcatagttcactatatcattgaacattattgtttagaggttt 440

                                                                       
Query: 241 tacaactttgcttgcatgcatttttttttctttttgcaggagtgggggcatgaccgaaag 300
           |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tacaactttgcttgcatggatttttttttctttttgcaggagtgggggcatggccgaaag 500

                               
Query: 301 gaagagggagggctttaaaa 320
           ||||||||||||||||||||
Sbjct: 501 gaagagggagggctttaaaa 520


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)