Query= MSMg01no439_a07.b1 MSMg01no439_a07.b1 CHROMAT_FILE:
MSMg01no439_a07.b1 PHD_FILE: MSMg01no439_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:00 2005
(465 letters)
>mm_chr17_46749450_46750314
Length = 865
Score = 845 bits (437), Expect = 0.0
Identities = 455/461 (98%)
Strand = Plus / Minus
Query: 5 gaattctcgggttctcagagagggtgggagcagctcattcaagcttacttaacttctgac 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaattctcggggccttagagagggtgggagcagctcattcaagcttacttaacttctgac 547
Query: 65 tgccttgggcataggccagctactaaaatatgaaaaatgtttgcccagcagcctccagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgccttgggcataggccagctactaaaatatgaaaaatgtttgcccagcagcctccagag 487
Query: 125 cgtggccagactgccctggccaaagaaaacatacccttacaattcattatttagcctcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cgtggccagactgccctggccaaagaaaacatacccttacaattcattatttagcctcct 427
Query: 185 cctgtgtgattgctagaagtccttcctccctggggaccttcctaagttggggggcacagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cctgtgtgattgctagaagtccttcctccctggggaccttcctaagttggggggcacagc 367
Query: 245 atggggagaagacaggaaggttcctactctttttggaggggaagttaagtcgttagggag 304
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 366 atggggagaagacaggaaggttcctacacactttggaggggaagttaagtcgttagggag 307
Query: 305 ctctgcctgcactgcacccctctttcttgactcccttctccagtttattttatgggtttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctctgcctgcactgcacccctctttcttgactcccttctccagtttattttatgggtttc 247
Query: 365 ctgctggcggactttggggtgttctgagggtttcctgatttgttttattttttaatgtgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctgctggcggactttggggtgttctgagggtttcctgatttgttttattttttaatgtgt 187
Query: 425 gtggatgttttgcctgcatgcatatccgtgtgacgtgcctg 465
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gtggatgttttgcctgcatgcatatccgtgtgacgtgcctg 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_a07.g1 MSMg01no439_a07.g1 CHROMAT_FILE:
MSMg01no439_a07.g1 PHD_FILE: MSMg01no439_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:00 2005
(344 letters)
>mm_chr17_46581058_46581801
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/348 (97%), Gaps = 8/348 (2%)
Strand = Plus / Plus
Query: 1 ctgatggtaaggggtcctgagtactagaccagaggaccagagaagtgagtaatcttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatggtaaggggtcctgagtactagaccagaggaccagagaagtgagtaatcttttta 260
Query: 61 aagccccattccaaattccctctgggaaacgcttgcccgggagggcaggtgcttgctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccccattccaaattccctctgggaaacgcttgcccgggagggcaggtgcttgctccc 320
Query: 121 agaggctccattcattcctattcaggaaaggggtatctgctccccagagacaccagggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaggctccattcattcctattcaggaaaggggtatctgctccccagagacaccagggag 380
Query: 181 caaagaatcatacaccctgttcctttctttcatagagctgactttggcaaggccggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagaatcatacaccctgttcctttctttcatagagctgactttggcaaggccggaggt 440
Query: 241 ggtgt----ttttttaagactaaatagaccaatgacccctgggtcccacttccccgatcc 296
||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgtcccctt----aagactaaatagaccaatgacccctgggtcccacttccccgatcc 496
Query: 297 cacactggccttctatggtcaccatggctcctaagagtctgggcgggc 344
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 cacactggccttctatggtcaccatggctcctaagagactgggcgggc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
