Query= MSMg01no442_e05.b1 MSMg01no442_e05.b1 CHROMAT_FILE:
MSMg01no442_e05.b1 PHD_FILE: MSMg01no442_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:21 2005
(254 letters)
>mm_chr17_60153537_60154190
Length = 654
Score = 385 bits (199), Expect = e-111
Identities = 241/255 (94%), Gaps = 4/255 (1%)
Strand = Plus / Plus
Query: 1 ttttggatgcttattggcttcctccccatgtgtgagtcct-ttcatacagaagtagcagc 59
||||||||||||||||||||||||||||||||| |||| | ||||||||| |||| |||
Sbjct: 201 ttttggatgcttattggcttcctccccatgtgtaagtc-tgttcatacaggagtaacagg 259
Query: 60 aacttctgattgccacattttaggaggaatttaaaaacacactaagctcttgaaactttc 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agcttctgattgccacattttaggaggaatttaaaaacacactaagctcttgaaactttc 319
Query: 120 tcattaaagttttagaagaaaagttcctccctagactccataggagtctaaacagcaagt 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 tcattaaagttttagaagaaaagttcctccctagactccatatgagtctaaacagcaagt 379
Query: 180 acagagca-cagtactgatattgtgtcaataaatgattatcaatcaaatattttataatt 238
||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 tcagagcatca-tacttatattgtgtcaataaatgattatcaaccaaatattttataatc 438
Query: 239 ctcaaaagaaaatag 253
|||||||||||||||
Sbjct: 439 ctcaaaagaaaatag 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_e05.g1 MSMg01no442_e05.g1 CHROMAT_FILE:
MSMg01no442_e05.g1 PHD_FILE: MSMg01no442_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:21 2005
(240 letters)
>mm_chr17_60309358_60309997
Length = 640
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%)
Strand = Plus / Minus
Query: 1 cttcgttatctaaagtcacatagttgaaatttaacttaaatatgttttctgacaagtaca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cttcgttatctaaagtcacacagttgaaatttaacttaaatatgttttctgacaagtaca 378
Query: 61 taggtttattagaagatatgtccaaagcattgcctgtctcactggcaactgtactcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taggtttattagaagatatgtccaaagcattgcctgtctcactggcaactgtactcagtg 318
Query: 121 atcttctatgcctgaccttctgtgcccctgagctcctattctatacagttctaagtctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atcttctatgcctgaccttctgtgcccctgagctcctattctatacagttctaagtctgt 258
Query: 181 accacctccaggagatgtcagatacaaaccagacccgggtaagaattgtgtatgtgg 237
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 accacctccaggagatgtcagatacaaaccagacctgggtaagaattgtgtatgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
