Query= MSMg01no448_i01.b1 MSMg01no448_i01.b1 CHROMAT_FILE:
MSMg01no448_i01.b1 PHD_FILE: MSMg01no448_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:48 2005
(151 letters)
>mm_chr7_145404847_145405397
Length = 551
Score = 240 bits (124), Expect = 3e-68
Identities = 141/148 (95%), Gaps = 4/148 (2%)
Strand = Plus / Plus
Query: 5 gaattcttcttttgct--caaagcaatttacttttcctttccttgtattcttctttgatt 62
|||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctttggctagca--gcaatttacttttcctttccttgtattcttctttgatt 262
Query: 63 cttgtcttgacaaactgctcgaatatcttaaaacaaatgcacggaagaaaaatcatcata 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttgtcttgacaaactgctcgaatatcttaaaacaaatgcacggaagaaaaatcatcatg 322
Query: 123 aaactgaatattagaaattaaaccttgt 150
|||||||||||||||||||||| |||||
Sbjct: 323 aaactgaatattagaaattaaatcttgt 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_i01.g1 MSMg01no448_i01.g1 CHROMAT_FILE:
MSMg01no448_i01.g1 PHD_FILE: MSMg01no448_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:48 2005
(445 letters)
>mm_chr17_59996771_59997618
Length = 848
Score = 835 bits (432), Expect = 0.0
Identities = 443/448 (98%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 1 taggagggagagaagagtctgggatagtcaggcatgagaagagatgggccctgaacactg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 805 taggagggagagaagagtctgggatagtcaggcatgagaagagatgtgccctgaacactg 746
Query: 61 atgaagatggccctgtgaacctgaggagagataactaactagccatggtgcaggaattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgaagatggccctgtgaacctgaggagagataactaactagccatggtgcaggaattag 686
Query: 121 aataaataaatgggttaattaagttacaagttagttaacaagctcatgcttatgacttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aataaataaatgggttaattaagttacaagttagttaacaagctcatgcttatgacttaa 626
Query: 181 gtctcacagtgactatttcgggaacttgggcacagatagaaaagctggttgttacaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtctcacagtgactatttcgggaacttgggcacagatagaaaagctggttgttacaaatg 566
Query: 241 atacacagaacatctggcacaaaatccaggctttgagtctgagaagtcccaggt---agg 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 atacacagaacatctggcacaaaatccaggctttgagtctgagaagtcccaggtagaagg 506
Query: 298 tgatttcctagccaaatgggagcagtaaaccaaaaagagacctaacaagtctcctttaga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgatttcctagccaaatgggagcagtaaaccaaaaagagacctaacaagtctcctttaga 446
Query: 358 gcctctactctgcaagaaggcttgtatctggctgcatggtgcttgaatagggtctgtgaa 417
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctctgctctgcaagaaggcttgtatctggctgcatggtgcttgaatagggtctgtgaa 386
Query: 418 cagctggctcaggtcttgggtgctagtg 445
||||||||||||||||||||||||||||
Sbjct: 385 cagctggctcaggtcttgggtgctagtg 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 848
Length adjustment: 10
Effective length of query: 435
Effective length of database: 838
Effective search space: 364530
Effective search space used: 364530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
