NCCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTATAAAGTCTTTGTATCCTTTATGTATTCTCTGACAAATTTA
TCATTGAGTAGCTTTTATCAGTTTCTATGAGTATGTGAGCTTTCTGTTGT
TTTTGTTATTGAAGTCCAGCCTTAATCTATGGTTAGCTGATAGAATGCAT
AGGATTTTGATTATTTCAATTTTCTTGTATATGTTGAGGCTTGTTTATTT
ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTC
TGACTATGATCAGTTTTGAAGAAGGTTCCATGAGGTGCTGAGAAGAAGGT
ATATTCTCTTGTTTTGGGATGAAATGTTCTGTAGATATCTGCTAAATCCA
TTTGGTTAAAAATGTCTGTTAGTTTGGCTCTGTTATGGTTTAGTTTCTGT
TTCAATGACCTGTCAGTTGGTGAGAGTTGGGTTTTGAACTCTCCCACTAT
AAACGTGTAAGATTCAAAACGTGTTTTGAACTTTAATAAAGTTTCTTTTA
TGAATGTGGGTGCCCTTGCATTTGGGGCATAGATGTTCAGAATGGCGACT
TCCTCTTGGTGTTTTTTTCCTTGATAAATGAGAAGTGTCCTTCCCCATCT
CATTTGATAACTTTAGGCTGAAAGTCTCTTTTACTGAATATTAGAATGAC
TACTTCAGCTTTTTTTTTTTTTTTGAGACATTTGCTTGGAAAAGTTTTTC
ACCCCTTTACTATTAN

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGCAATAAGTGGTGATAGCC
TTGAAAATGTTAAATATTAGATTTTAAATTGCTTATTATGTTTAACATGT
AGTACATATGAGTAATTATTTTTACCTTGAATGATCAATCATGAGAAAGA
ATAAAAAAACTATAATAATTTTCACATGGAGCCCAAAAGGGATTTAAAAA
TATATTAGACAATATAAATAAGTGTTATAAGAAAGTATTTGTCATGTCAT
GAATTAAAATTAAGATATTTTTGACATACATTTTATAGTCTTATTTTACT
TAACTTATTAAAATGTGAGGTCTTCTAAGTATTACCACTTTAACAAAAAT
ATTACATTAATTATTTTAATAATCTCCTTTCAAATAATAATTAAGAGTAT
GGTAAGTTAAATAAACTGTGATCAGTTTAAACATTCACAGCATAATCTGC
TGAGCTTGGTAAATAGAACCATAATTGAAAACGAGTTGTGATGCTTTGTT
ACGATTTAAATAATCATTTTAATTAGTTTCCAAGTAGATTATTGTTTTGA
TTATTTGTAAAAGTAAGGTAACTAAATATTTCTTATCATTTATGACCATT
AAGAAATTGCAGAGGATGGGTTTTTTATTAGATGATTAAATTATTAGAAA
ATTTGAAATATTTGAATAATAATGTAGCTCCCTGAAGACAATGTGAAAAT
TCTAATTTCTTTGAN

Query= MSMg01no451_j21.g1 MSMg01no451_j21.g1 CHROMAT_FILE:
MSMg01no451_j21.g1 PHD_FILE: MSMg01no451_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:56 2005
         (642 letters)



>mm_chr17_60670996_60672037
          Length = 1042

 Score =  980 bits (507), Expect = 0.0
 Identities = 612/665 (92%), Gaps = 32/665 (4%)
 Strand = Plus / Minus

                                                                        
Query: 9    aagtggtgatagccttgaaaatgttaaatattagattttaaattgcttattatgtttaac 68
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1042 aagtggtgatagccttgaaaatgttaaatattagactttaaattgcttattatgtttaac 983

                                                                        
Query: 69   atgtagtacatatgagtaattatttttaccttgaatgatcaatcatgagaaagaataaaa 128
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  atgcagtacatatgagtaattatttttaccttgaatgatcaatcatgagaaagaataaaa 923

                                                                        
Query: 129  aaactataataattttcacatggagcccaaaagggattt-aaaaatatattagacaatat 187
            ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 922  aaactataataattttcacatggagcccaaaagggatttaaaaaatgtattagacaatat 863

                                                                        
Query: 188  aaataagtgttataagaaagtatttgtcatgtcatgaattaaaattaagatatttttgac 247
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862  aaataaatgttataagaaagtatttgtcatgtcatgaattaaaattaagatatttttgac 803

                                                                        
Query: 248  atacattttatagtcttattttacttaacttattaaaatgtgaggtcttctaagtattac 307
            ||||||||||||| ||| ||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 802  atacattttatagccttgtttcatttaacttattaaaatgtgaggtcttctaaatattac 743

                                                                        
Query: 308  cactttaacaaaaatattacattaatta-ttttaataatctcctttcaaataataattaa 366
            ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 742  cactttaac-aaaatattacattaattatttttaataatctcttttcaaataataattaa 684

                                                                        
Query: 367  gagtatggtaagttaaataaactgtgatcagtttaaacattcacagcataatctgctgag 426
            || ||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||
Sbjct: 683  gaatatggtaagctaaataaggtgtgatcagtttaaacagtcacagcataatctgctgag 624

                                                                        
Query: 427  cttggtaaatagaaccataattgaaaacgagttgtgatgctttgttacgatttaaataat 486
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 623  cttggtaaatagaaccataattgaaaacgagttgtgatgctttgttatgatttaaataat 564

                                                                        
Query: 487  c----------------------------attttaattagtttccaagtagattattgtt 518
            |                            |||||||||||||||||||||||||||||||
Sbjct: 563  cattttaattagttatgatttaaataataattttaattagtttccaagtagattattgtt 504

                                                                        
Query: 519  ttgattatttgtaaaagtaaggtaactaaatatttcttatcatttatgaccattaagaaa 578
            |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503  ttgattatttgtaaaagttaggtaactaaatacttcttatcatttatgaccattaagaaa 444

                                                                        
Query: 579  ttgcagaggatgggttt-tttattagatgattaaattattagaaaatttgaaatatttga 637
            ||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||
Sbjct: 443  ttgcagaggatgggtttatttattagctgattaaattattacaagatttgaaatatttga 384

                 
Query: 638  ataat 642
            |||||
Sbjct: 383  ataat 379


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)