NNNAACTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGCTGTGAAAATTTCTATGTTCATTTACTTTGTAGATC
TTATAGTACCCCACAGAAGCACACAGATGCATATGCACAAAAATACATGT
ATGCGTGCGTACACACACACCAAGTTGTTTAAATGTTAGTGAAAAGAATG
CTTCTGCAAATGACTACATCACAACTCCTGAGCATAAATTACAAGTATCT
GGATATTTCCTATTAGAGGTCAATGTTTTGAGCATTCTCTTATTGATGAT
CTTAAAACAAATTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCCTACACAGTTATG
AGTGTGCCCGTGAGTCCACAAGTTGATGTCAGCTCTTGTGTTGTATTTTT
CTCCAACTTCCTTATTGTTTGAGACAGGTTCTCTCTATGTAGGCCTGGCT
GTCCTGGAACTCATCATGTATGTCAGGTTCAATAGAAAAAACCAAATATT
TTGGGGATCCTCTATTCATATCGCTACCTTTTATTTTGTTATTTTATGTG
CATTTATGTGCGTATTTGGTGTGTGTGTGTATATGGATGCTGTTTGAGGA
TGTTGGATAACCATTCCTTTATGCCTTATTCCTTGTAATCAGACTTTCTC
ATTGACCCTTAAAGCAAGATAATGGTCATTATGTTTCTGTGT

CACCACACTATGCTCAGAGTCTCCTGGCGGCCGCCTTGTTCACAAGAGGG
AGGGGACACTACACAATGACCCGCGGGATTCTCTTCACCACCTAATGCTG
ACTTTAATGATGTATGCTGATAATGCGGAAATAGTCTACAGAATACCCTT
GGACATGCATCCCTTCTTGACCCCCTGTTCTACTGCCCCACTGACACGCC
ACAACGGCAAAGGAGAGGAAGACCTCGCATATTAAATTACCCTTCTAGTT
TCCCCTGGCTAGCTGCCTGCAGTCCTTAATCTCGCCCACATTTTCCTGTC
TTCTGAGCTCACACTATTTACAAGCATCTCCTTTAGCCTTTACTCTAAGG
GATTCCCGCCCCCTACACCCATGCACCTGCTGTGACTTACCCATTAATGC
CTAGCACCCGCCAAAGACTTGATTACCCAGGTGTTCAGATGCATCTGTTT
CAGGGAAGTTCTGCTATCCTGCTATCTCACGCTTTGCTCAACATGCACGT
GATATCACCCCCCGAGTCTGACAACTATAATTTCCCGGGGCGAGGACCCG
TGCTCAGAACCACTATCTGGAAAAGTCATTTCAACAATTCTGCAACGGCG
GGGGGAGTAAAAGCCCAGACTAGCCTGTGACAAATCCAGCTCACCATAAT
TCCTGAGAGATTCAACCGACCCCCTCCGGACCTCATCACCGAGACGACCT
TTCTACTTGCATCCCTCTCCGTATCAATGAATTTCCTC

Query= MSMg01no452_o06.b1 MSMg01no452_o06.b1 CHROMAT_FILE:
MSMg01no452_o06.b1 PHD_FILE: MSMg01no452_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:36 2005
         (481 letters)



>mm_chr17_73104897_73105777
          Length = 881

 Score =  818 bits (423), Expect = 0.0
 Identities = 453/477 (94%), Gaps = 22/477 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgctgtgaaaatttctatgttcatttactttgtagatcttatagtaccccac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaattctttgctgtgaaaatttctatgttcatttactttgtagatcttatagtaccccac 403

                                                                       
Query: 65  agaagcacacagatgcatatgcacaaaaatacatgtatgcgtgcgtacacacacaccaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agaagcacacagatgcatatgcacaaaaatacatgtatgcgtgcgtacacacacaccaag 343

                                                                       
Query: 125 ttgtttaaatgttagtgaaaagaatgcttctgcaaatgactacatcacaactcctgagca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttgtttaaatgttagtgaaaagaatgcttctgcaaatgactacatcacaactcctgagca 283

                                                                       
Query: 185 taaattacaagtatctggatatttcctattagaggtcaatgttttgagcattctcttatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taaattacaagtatctggatatttcctattagaggtcaatgttttgagcattctcttatt 223

                                                                       
Query: 245 gatgatcttaaaacaaattctctctctctttctctctctctctctctctctctctctctc 304
           ||||||||||||||||||                      ||||||||||||||||||||
Sbjct: 222 gatgatcttaaaacaaat----------------------tctctctctctctctctctc 185

                                                                       
Query: 305 tctctctctctctctctctctctctctctgtgcctacacagttatgagtgtgcccgtgag 364
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 184 tctctctctctctctctctctctctctgtgtgcctacacagttatgagtgtgcccgtgag 125

                                                                       
Query: 365 tccacaagttgatgtcagctcttgtgttgtatttttctccaacttccttattgtttgaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tccacaagttgatgtcagctcttgtgttgtatttttctccaacttccttattgtttgaga 65

                                                                    
Query: 425 caggttctctctatgtaggcctggctgtcctggaactcatcatgtatgtcaggttca 481
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 64  caggttctctctatgtaggcctggctgtcctggaactcatcatgtaggtcaggttca 8


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)