NNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAAATTTTTTTTGTTTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCT
GGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGTCCTCGAACTCGGAAA
TCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCA
CTGCCTGGCTAAGAAAAAAAATTTAAAGGAGAAAAAAAAGCCCCAGTTGG
CTCCTAACAAGGATGTTATGAATTCTTATCAACTCACCGCTTAAACCTGG
GTAAAAATAGGCAGATTTGTTAACTCCCCATGCCTTACTTGTATAATGTA
CATGCTTTCATTTATATAATGGGGTTGACATTCGCACATACATTTTGGGG
ATGCTGCAAAGATTAGAAAATAAATATAAAGCATTTAGGACACAATCTTG
CACATAGTAACTGCTCAGTAATATGAGTTCTTATTACTATAAAGCTACTT
CTTTTTCAAAGGCACCAACTGTAAGAAAAAGAAAAGGATGCCCACCCTCA
CCCCTCAGTTTATGCTTTGATGGGGAACGCTTGATGATTACGAGTAACAG
TTTCCAAACGGTGGTATAGACGAAAGAAGAGATACCTGTATAAACTTATC
AGCATTTTTTTCAGTCTTTTATAGAATATTATTCCTAGGAAATGATGGGA
TCGTAATAGTAAGATCAGGTCCTGACAT

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTGAAATGCACTCACTGATA
AGTGGATATCAGCCCAGAAACATAGAACACCTAAGATACAATTTGCAAAA
CACAAGAAAATCAAGAAGAGGGAAGACCAGTGGGTGGATACTTCATTCCT
CCTTAGAATAGGGAACAAAATACCCATGAAAGGAGTTACAGAGACAAAGT
TTGGAGCTAAGATGAAAGGATGGACTATCCAGAGACTACCCCACCTGGGG
ATCCATCCCATAATCAGCCATCAAACCCAGACACTATTGCTTATGCCAGC
AAGATTTTGATGAAGGGACCCTGATATAGCTGTCTCTTGTGAGGATATGC
CAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATAAAATGG
AACACAGGGCTCCCAATGGAGAAGCTAGAGAAAGCACCCAAGGAGCTGAA
GGGATCTGCAACTGTATAGGTGGAACAACAATATGAACTAACCAGTACCC
CCAGAGCTCTTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTCGG
CCATCACTGGGAAGAGAGGCCCCTTGGTAATGCAAATTTTATATGCTCCA
GTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTTGGTGGGTAGGGGAGC
AGGGTATTAGGGAACTTTTCTA

Query= MSMg01no455_i07.b1 MSMg01no455_i07.b1 CHROMAT_FILE:
MSMg01no455_i07.b1 PHD_FILE: MSMg01no455_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:03 2005
         (643 letters)



>mm_chr17_11082315_11083357
          Length = 1043

 Score = 1181 bits (611), Expect = 0.0
 Identities = 629/635 (99%), Gaps = 2/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   ttttttttgttttttttcgagacagggtttctctgtatagccctggctgtcctggaactc 68
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttttttttg-tttttttcgagacagggtttctctgtatagccctggctgtcctggaactc 604

                                                                       
Query: 69  actttgtagaccaggctgtcctcgaactcggaaatccgcctgcctctgcctcccaagtgc 128
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 603 actttgtagaccaggctgtcctcgaactcagaaatccgcctgcctctgcctcccaagtgc 544

                                                                       
Query: 129 tgggattaaaggtgtgcgccaccactgcctggctaagaaaaaaaatttaaaggagaaaaa 188
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgggattaaaggtgtgtgccaccactgcctggctaagaaaaaaaatttaaaggagaaaaa 484

                                                                       
Query: 189 aaagccccagttggctcctaacaaggatgttatgaattcttatcaactcaccgcttaaac 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaagccccagttggctcctaacaaggatgttatgaattcttatcaactcaccgcttaaac 424

                                                                       
Query: 249 ctgggtaaaaataggcagatttgttaactccccatgccttacttgtataatgtacatgct 308
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 423 ctgggtaaaaataggcagatttgttaactccccatgccttacttgtataatgcacatgct 364

                                                                       
Query: 309 ttcatttatataatggggttgacattcgcacatacattttggggatgctgcaaagattag 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttcatttatataatggggttgacattcgcacatacattttggggatgctgcaaagattag 304

                                                                       
Query: 369 aaaataaatataaagcatttaggacacaatcttgcacatagtaactgctcagtaatatga 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaataaatataaagcatttaggacacaatcttgcacatagtaactgctcagtaatatga 244

                                                                       
Query: 429 gttcttattactataaagctacttctttttcaaaggcaccaactgtaagaaaaagaaaag 488
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 243 gttcttattactataaagctacttctttttcaaaggcatcaactgtaagaaaaagaaaag 184

                                                                       
Query: 489 gatgcccaccctcacccctcagtttatgctttgatggggaacgcttgatgattacgagta 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gatgcccaccctcacccctcagtttatgctttgatggggaacgcttgatgattacgagta 124

                                                                       
Query: 549 acagtttccaaacggtggtatagacgaaagaagagatacctgtataaacttatcagcatt 608
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123 acagtttccaaacggtggtatagacgaaagaagagatacctgtataaacttatcagca-t 65

                                              
Query: 609 tttttcagtcttttatagaatattattcctaggaa 643
           |||||||||||||||||||||||||||||||||||
Sbjct: 64  tttttcagtcttttatagaatattattcctaggaa 30


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)