Query= MSMg01no458_h14.b1 MSMg01no458_h14.b1 CHROMAT_FILE:
MSMg01no458_h14.b1 PHD_FILE: MSMg01no458_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:05 2005
(326 letters)
>mm_chr17_73385569_73386294
Length = 726
Score = 609 bits (315), Expect = e-179
Identities = 324/327 (99%), Gaps = 2/327 (0%)
Strand = Plus / Minus
Query: 1 gttgccctttggccttgtgattcttcctgcttcctcccagactggatcataaataaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gttgccctttggccttgtgattcttcctgcttcctcccagactggatcataaataaaagt 467
Query: 61 ccagtatacctacatatttacatgttccatgaatcactggcgtccattttccccatcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ccagtatacctacatatttacatgttccatgaatcactggcgtccattttccccatcttg 407
Query: 121 tcaccccaaacagttttctctttagcactcccagcaagggctcagcaccagccaatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcaccccaaacagttttctctttagcactcccagcaagggctcagcaccagccaatcatt 347
Query: 181 gaagtgaaagtgtacatttttattgtt-aaaaaattccttgtctaatacaggaaaaattt 239
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 346 gaaatgaaagtgtacatttttattgttaaaaaaattccttgtctaatacaggaaaaattt 287
Query: 240 cacaaatacaaataattaactgcagaatagctgccaccaacccccccttttccttaaaaa 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 286 cacaaatacaaataattaactgcagaatagctgccaccaa-ccccccttttccttaaaaa 228
Query: 300 tctacatccagcccaggcaagtcagat 326
|||||||||||||||||||||||||||
Sbjct: 227 tctacatccagcccaggcaagtcagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_h14.g1 MSMg01no458_h14.g1 CHROMAT_FILE:
MSMg01no458_h14.g1 PHD_FILE: MSMg01no458_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:05 2005
(325 letters)
>mm_chr17_73255312_73256037
Length = 726
Score = 567 bits (293), Expect = e-166
Identities = 317/325 (97%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 1 attatggaagactccagaacaacttctgctggtccgacttaaccctaggataaaagccag 60
|||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||
Sbjct: 201 attatggaagactccagaacaacttctgctggcccaacttaaccccaggataaaagccag 260
Query: 61 aagaaagaacctgtttggggactccctgg-aacctggatttggtctcctggtcttgtgct 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aagaaagaacctgtttggggactccctgggaacctggatttggtctcctggtcttgtgct 320
Query: 120 cacctcactttgggaagaaagacactgggacttcctgaagggctgtacacatggaagaag 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 321 cacctcactttgggaagaaagacactgggacttcctgaagggctgtacacgtggaagcag 380
Query: 180 gggcacagcatctgccattccacaagcaggagctgtggtctttcctttatcattctcaga 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcacagcatctgccactccacaagcaggagctgtggtctttcctttatcattctcaga 440
Query: 240 gcagcagactgtctccacttaggagtcgagaaaaagctaaggggaggttggaccacacgg 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 gcagcagactgtctccacttaggagtcgagaaaaagctaaggggaggtcggaccacacgg 500
Query: 300 tggcagacctagactcactcactgc 324
|||||||||||||||||||||||||
Sbjct: 501 tggcagacctagactcactcactgc 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
