Query= MSMg01no458_h19.b1 MSMg01no458_h19.b1 CHROMAT_FILE:
MSMg01no458_h19.b1 PHD_FILE: MSMg01no458_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:06 2005
(601 letters)
>mm_chr17_49372356_49373355
Length = 1000
Score = 1054 bits (545), Expect = 0.0
Identities = 584/597 (97%), Gaps = 1/597 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaggcagttacaggtagtcttgatagtcaaacacccactgacaaagcaggatg 64
|||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaggcaggcaaaagtagtcttgttagtcaaacacccactgacaaagcaggatg 264
Query: 65 gctgttgtttctctgtggcttactttggtgctaaagtatcaaggttgccaccccctttct 124
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 265 gctgttgtttctctgtggcttactttgatgctaaagtatcaaggttgacaccccctttct 324
Query: 125 ggcaaattcttgttatgtttcctagcaggaatggtagggagttgtgtctgacttctgcag 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 325 ggcaaattcttgttatgtttccaagcaggaatggtagggagttgtgtctgactgctgcag 384
Query: 185 tgtgctctgtctcctttaggattggtgagtcctgagatttcctcgttctactcaagttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgctctgtctcctttaggattggtgagtcctgagatttcctcgttctactcaagttct 444
Query: 245 tccacagcagacttcatggctctggggtccagctgtgatgtgtgagagtatgctgtgttt 304
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 tccacagcagact-catggctctggggtccagctgtgatgtgtgagagtgtgctgtgttt 503
Query: 305 gagctcccccgatactgcctgaatcattgaagagttgagaggtagctcattacagaaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagctcccccgatactgcctgaatcattgaagagttgagaggtagctcattacagaaatg 563
Query: 365 gttcccaccctttaagatttggttctaatttatctattagtcttttggctctggtttcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttcccaccctttaagatttggttctaatttatctattagtcttttggctctggtttcct 623
Query: 425 tcatggttcaatttctccttggtcaattctcctggccccaacatggtcatgatgtagtgc 484
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 tcatggttcaatttctctttggtcaattctcctggccccaccatggtcatgatgtagtgc 683
Query: 485 ccataagcggcatctttctcagatattcctatagtaggggcatcttctcctgtagcaggc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccataagcggcatctttctcagatattcctatagtaggggcatcttctcctgtagcaggc 743
Query: 545 actgtgggtggggatgctgctcctcacatagcagaaactatttcaaaaggaagagcc 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 actgtgggtggggatgctgctcctcacatagcagaaactatttcaaaaggaagagcc 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_h19.g1 MSMg01no458_h19.g1 CHROMAT_FILE:
MSMg01no458_h19.g1 PHD_FILE: MSMg01no458_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:06 2005
(244 letters)
>mm_chr17_49491548_49492191
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 cataggaaaccaagagaagattgtcatctcctagcagagagccaaactcgaaattccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 cataggaaaccaagagaagattgtcatctcctagcagagagccaaactctaaattccttg 385
Query: 61 agttgataagacagatgatgttactaaataacttgatggaattagatttcaaagagcatt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agttgataaaacagatgatgttactaaataacttgatggaattagatttcaaagagcatt 325
Query: 121 aagatccttggaggggcaacttggttatcaactggtcacttagcttagaaccaggttact 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 aagatccttggaggggcaacttggctatcaactggtcacttagcttagaaccaggttact 265
Query: 181 ctgttgtaccagagaaaactttccttgatgctaaggtccatttcctagagaatttctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgttgtaccagagaaaactttccttgatgctaaggtccatttcctagagaatttctaaa 205
Query: 241 ggga 244
||||
Sbjct: 204 ggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
