Query= MSMg01no458_o11.b1 MSMg01no458_o11.b1 CHROMAT_FILE:
MSMg01no458_o11.b1 PHD_FILE: MSMg01no458_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:37 2005
(296 letters)
>mm_chr17_9984818_9985511
Length = 694
Score = 538 bits (278), Expect = e-157
Identities = 291/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 1 ttatttgattgtagtcaagtcccattctaagctaacagaatccaagtagaaagtgatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatttgattgtagtcaagtcccattctaagctaacagaatccaagtagaaagtgatggg 260
Query: 61 gccagggatgtggtcagtggtggagcactcatgaggcccatggtggactactctcacggc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagggatgtggtcagtggtggaacactcatgaggcccatggtggactactctcacggc 320
Query: 121 atgcacagatcttgggtttcatccccagcataaaatactaggcagtgggtcatttgggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcacagatcttgggtttcatccccagcataaaatactaggcagtgggtcatttgggct 380
Query: 181 tcaggacagttgttatatgtgtgttggttgtttttaccattatgcagttaaactcagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggacagttgttatatgtgtgttggttgtttttaccattatgcagttaaactcagat- 439
Query: 241 ctgtgtagacatgcttgatttgcaatcatagaaagcacttgtcagcccttaatctg 296
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 -tgggtagacatgcttgatttgcaatcatagaaagcacttgtcagcccttaatctg 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 694
Length adjustment: 9
Effective length of query: 287
Effective length of database: 685
Effective search space: 196595
Effective search space used: 196595
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_o11.g1 MSMg01no458_o11.g1 CHROMAT_FILE:
MSMg01no458_o11.g1 PHD_FILE: MSMg01no458_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:37 2005
(120 letters)
>mm_chr17_10136508_10137027
Length = 520
Score = 232 bits (120), Expect = 5e-66
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 1 ttttaaaatgcagtgtcccaggcccagactttccttagcctggttaacttgggagcgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttttaaaatgcagtgtcccaggcccagactttccttagcctggttaacttgggagcgagc 261
Query: 61 agggagaggaggggctggctgccgaggaacaggctctcttagttttatagtttgatagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agggagaggaggggctggctgccgaggaacaggctctcttagttttatagtttgatagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 520
Length adjustment: 8
Effective length of query: 112
Effective length of database: 512
Effective search space: 57344
Effective search space used: 57344
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
