Query= MSMg01no460_b07.b1 MSMg01no460_b07.b1 CHROMAT_FILE:
MSMg01no460_b07.b1 PHD_FILE: MSMg01no460_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:14 2005
(227 letters)
>mm_chr17_66588480_66589106
Length = 627
Score = 385 bits (199), Expect = e-111
Identities = 217/223 (97%)
Strand = Plus / Minus
Query: 5 gaattctgattaacagcaattgctccaagaaaacattttcaataccagacggacagagga 64
||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattctgacaaagagaaattgctccaagaaaacattttcaataccagacggacagagga 322
Query: 65 gtcgtcagccagagctgctgtgacaagagaacatggccgaccatctcaatggacttcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcgtcagccagagctgctgtgacaagagaacatggccgaccatctcaatggacttcact 262
Query: 125 agggtggatgtgagagaagggtctaagatttctgtcccgtgactgacaaagaggaaagag 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggtggatgtaagagaagggtctaagatttctgtcccgtgactgacaaagaggaaagag 202
Query: 185 gaaggggaggaagaggatgaggaagggaaggaagaggaggagg 227
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagaggaggaagaggatgaggaagggaaggaagaggaggagg 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no460_b07.g1 MSMg01no460_b07.g1 CHROMAT_FILE:
MSMg01no460_b07.g1 PHD_FILE: MSMg01no460_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:14 2005
(534 letters)
>mm_chr17_66430099_66431032
Length = 934
Score = 946 bits (489), Expect = 0.0
Identities = 521/533 (97%), Gaps = 3/533 (0%)
Strand = Plus / Plus
Query: 1 atttcttacttaccaagatctctataactgagtaattccaatatataatgcgatatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttcttacttaccaagatctctataactgagtaattccaatatataatgcgatatatat 260
Query: 61 taagactgagctggaaagggagaaactaagtgtctttctgtgttttaattctggcctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagactgagctggaaagggagaaactaagtgtctttctgtgttttaattctggcctcac 320
Query: 121 tagtacctcagagcagtcatccgagtcctttactggtaactcaacctgaacttgttctga 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtacctcagaggagtcatccgagtcctttactggtaactcaacctgaacttgttctga 380
Query: 181 agaagacgtagtttgagtaagagtggcccccctgggctcctctatttgaatgctcactca 240
|||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 381 agaaga---agtttgagtaagagtggctcccctgggctcctctatttaaatgctcactca 437
Query: 241 ctgaccttcgagtggaactagctgaaaggattaggaggcgtaggcttgcggaaggaagtg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 ctgaccttcgagtggaactagctgaaaggattaggaggcgtaggcttgcgaaaggaagtg 497
Query: 301 tgtcactgacagtgccaagcttagtatctctgttactacctatagatcaggatgtagctt 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtcactgacagtgccaagcttagtgtctctgttactacctatagatcaggatgtagctt 557
Query: 361 caactgcttctccaacaccatgccactgccatgcttcctttcatgatgataatgaactaa 420
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caactacttctccagcaccatgccactgccatgcttcctttcatgatgataatgaactaa 617
Query: 421 acctctgaaactataacataaggaaggccccaactgtgttttcttttttataagagttgc 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acctctgaaaccataacataaggaaggccccaactgtgttttcttttttataagagttgc 677
Query: 481 catgtcatggtgtctcttcacagcaataagaaaatataacataggaaaacacc 533
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 678 catgtcatggtgtctcttcacagcaataagaaaatataaaataggaaaacacc 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
