Query= MSMg01no460_o20.b1 MSMg01no460_o20.b1 CHROMAT_FILE:
MSMg01no460_o20.b1 PHD_FILE: MSMg01no460_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:20 2005
(449 letters)
>mm_chr17_55666779_55667627
Length = 849
Score = 822 bits (425), Expect = 0.0
Identities = 440/445 (98%)
Strand = Plus / Plus
Query: 5 gaattcccaactttccctgtatcatttttttcctatacatatacaaacaaaatgcattgt 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccaacaatctctgtatcatttttttcctatacatatacaaacaaaatgcattgt 264
Query: 65 ccacctgcactaatcactaggcaaatacgatgaatttaacttttacacagaaataaaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccacctgcactaatcactaggcaaatacgatgaatttaacttttacacagaaataaaaat 324
Query: 125 accatgaatttctttttactcatagttttacatgaagcaaattcattttcttgtagatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accatgaatttctttttactcatagttttacatgaagcaaattcattttcttgtagatct 384
Query: 185 cagcaacttcagcacttcacctttttcctttccatagtttatctagttgtaagaaagata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagcaacttcagcacttcacctttttcctttccatagtttatctagttgtaagaaagata 444
Query: 245 ttatcatttcttcatataaacaacttggttatagctgcctattatccgaatgctgtggca 304
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 ttatcatttcttcatataaacaacttggcaatagctgcctattatccgaatgctgtggca 504
Query: 305 ccatctacacatatagcatgcagttgttaggagctggtttaatacatctattttttagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccatctacacatatagcatgcagttgttaggagctggtttaatacatctattttttagaa 564
Query: 365 tagtagtagtagaagatatgacttgtccattcacaacttctgtagtgtctttctgcccca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagtagtagtagaagatatgacttgtccattcacaacttctgtagtgtctttctgcccca 624
Query: 425 tggcatttcactctgttccatgtca 449
|||||||||||||||||||||||||
Sbjct: 625 tggcatttcactctgttccatgtca 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_o20.g1 MSMg01no460_o20.g1 CHROMAT_FILE:
MSMg01no460_o20.g1 PHD_FILE: MSMg01no460_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:20 2005
(442 letters)
>mm_chr17_55876118_55876959
Length = 842
Score = 760 bits (393), Expect = 0.0
Identities = 429/441 (97%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 3 gaaaaaaatgtacatttttctttttctaatccactccttccttgttgagattttacatat 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 834 gaaaaaaatgtacatttttctttttctaatccaccccttccttgttgagattttacatat 775
Query: 63 gatgataaggggtaagtaatataccttacacatttcagtaactattccttcctcgaatat 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 774 gatgataaggggtaagtaatataccttacacatttcagtaactattccttcctctaatat 715
Query: 123 tattcaccattctttggcaagttttctgtacctgtatataactaaattaatatataatgt 182
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 714 taatcaccattctttggcaagttttctgtacctgtatataactaaattagtatataacgt 655
Query: 183 attaattaaatacttctaatgaaatgcttttagtcgggccagccattaaaatggaaatca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 attaattaaatacttctaatgaaatgcttttagtcgggccagccattaaaatggaaatca 595
Query: 243 tgttctctaggtaaccacaggttcactattaggtctgtaaatacaaaagccacactatac 302
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 594 tgttctccaggtaaccacaggttcactattaggtctgtcaatacaaaagccacactatac 535
Query: 303 ttaaaagacagcagcttttgagccagtagaaatgcaaacctggtccatggaagggctcag 362
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 534 ttaaaagacagcagcttttgagccagtagaaatgcaaacatggtccatggaagggctcag 475
Query: 363 catagcctacttctgaggaggcatttgctgtt-gacagctgctgcaggagactcatgttt 421
|||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||
Sbjct: 474 catagcctacttctgaggaggcatttgctgttag-cagttgctgcaggcgactcatgttt 416
Query: 422 tggagggctatcacaactggc 442
|||||||||||||||||||||
Sbjct: 415 tggagggctatcacaactggc 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
