Query= MSMg01no461_e09.b1 MSMg01no461_e09.b1 CHROMAT_FILE:
MSMg01no461_e09.b1 PHD_FILE: MSMg01no461_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:49 2005
(234 letters)
>mm_chr17_52899195_52899832
Length = 638
Score = 383 bits (198), Expect = e-111
Identities = 227/238 (95%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 1 attatgttatgaggtgctagcacaaaagaaaggggagaaatggttcaaggaacaaaaaga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatgttatgagatgctagcacaaaagaaaggggagaaatggttcaaggaacaaaaaga 260
Query: 61 cattgtgaatgaaagggtatagctggaatcagataaagaaaaggaagctagcacagactc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 cattgtgaatgaaagggtatagctggaatcagataaagaaaaggaagctggcacagactc 320
Query: 121 tgaacagagt-agaaggaggcttatggactctgaacctgtcaaaactgatatatcagcag 179
|||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||
Sbjct: 321 tgaacagagtgagaaggaggcttatggactgtgaacctgtcaaaactgacatatcaccag 380
Query: 180 gagatgacagaaatccagag---gagagctgctaaattgaacctgattttcaagtagc 234
||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 381 gagatgagagaaatccagagaaggagagctgctaaattgaacctgatttccaagtagc 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 638
Length adjustment: 9
Effective length of query: 225
Effective length of database: 629
Effective search space: 141525
Effective search space used: 141525
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_e09.g1 MSMg01no461_e09.g1 CHROMAT_FILE:
MSMg01no461_e09.g1 PHD_FILE: MSMg01no461_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:49 2005
(321 letters)
>mm_chr17_53111162_53111882
Length = 721
Score = 455 bits (235), Expect = e-132
Identities = 290/311 (93%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 17 ctgcctctgcctcccaagtgctgggattaaaggcatgcaccaccactcccggctttccat 76
||||||||||||| |||||||||||||||||| ||||| ||||||| || ||||||||||
Sbjct: 217 ctgcctctgcctctcaagtgctgggattaaagtcatgcgccaccacacctggctttccat 276
Query: 77 caagtcttatgtggaccgtttctttattcccagaagaaaatgagtaataggaagaattgc 136
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 277 caagtcttatgtggactgtttctttattcccagaagaaaatgagtactaggaagaattgc 336
Query: 137 taactccaaataatttcctgaatttattgaccagtggaatcctattcctgttgctggatc 196
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 337 taactccaaataatttcctgaattcattgaccagtggagtcctattcctgttgctggatc 396
Query: 197 tgttcattcaatggtctttcttggggttaggattacacaggaggttgttgtttagagttt 256
|||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 397 tgttcattcaatggtctttcttggggttaggattacacaggatcttgctggttagagttt 456
Query: 257 ccttgtcatttatggccttgttcgtgtcctttttgactgatctttttt-t-----tgtgg 310
|||||||||||||||||||| || |||||||||||||||||||||||| | |||||
Sbjct: 457 ccttgtcatttatggccttgatcatgtcctttttgactgatcttttttgtgtgtgtgtgg 516
Query: 311 ttgaggttggc 321
|||||||||||
Sbjct: 517 ttgaggttggc 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
