Query= MSMg01no461_p09.b1 MSMg01no461_p09.b1 CHROMAT_FILE:
MSMg01no461_p09.b1 PHD_FILE: MSMg01no461_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:46 2005
(315 letters)
>mm_chr17_30680959_30681672
Length = 714
Score = 516 bits (267), Expect = e-151
Identities = 303/315 (96%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 1 tgatgaacagcagtatggaagtgtaagctgaataaaccctttcctccccaactgcttctt 60
|||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgatgaacagcaatgtggaattgtaagctgaataaaccctttcctccccaactgcttctt 557
Query: 61 ggtcatgatgtttgtgtaggaatagaaaccctgactaagacaggtaagatcaagtttaaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggtcatgatgtttgtgcaggaatagaaaccctgactaagacaggtaagatcaagtttaaa 497
Query: 121 acattaaaaggtgacaattttataggaaaaaaaaatccattttcctagtgggctatatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 496 acattaaaaggtgacaattttataggaaaaaaaaatccattttcctagtgggctatagga 437
Query: 181 agctttggactgaaactttctttgcctaagggttttctgtttctaggataaaaattgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agctttggactgaaactttctttgcctaagggttttctgtttctaggataaaaattgtac 377
Query: 241 cttgagttcattcccgtctgtttccatattctgaagcacacacccttgccttggttttgg 300
|||||||| | || ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 376 cttgagtt-aggcctgtctgtttccatattctgaagcacacacccttgccttgggtttgg 318
Query: 301 ggagagttctgtgtt 315
|||||||| ||||||
Sbjct: 317 ggagagttttgtgtt 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_p09.g1 MSMg01no461_p09.g1 CHROMAT_FILE:
MSMg01no461_p09.g1 PHD_FILE: MSMg01no461_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:46 2005
(454 letters)
>mm_chr17_30505919_30506773
Length = 855
Score = 841 bits (435), Expect = 0.0
Identities = 450/455 (98%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 1 aataaaatggtattaaaagagacaaagattgctgtcagatataaatccctttttatcttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaatggaattaaaagagacaaagattgctgtcagatataaatccctttttatcttt 260
Query: 61 cctctgagtccaggcctccacaaatggttcttttttaatatgcaaaatgtaccctgccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctctgagtccaggcctccacaaatggttcttttttaatatgcaaaatgtaccctgccaa 320
Query: 121 caaaagcctgcttagttcatacagaagctagatgagttagcatttaaaactatcataatc 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaagcctgcttagctcatacagaagctagatgagttagcatttaaaactatcataatc 380
Query: 181 catctctgtaagatatgaagtagaaggtcttcataaacagtcacaaactgggaaggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catctctgtaagatatgaagtagaaggtcttcataaacagtcacaaactgggaaggaaaa 440
Query: 241 tcatagtgttcaggctggagaggaccaggaaaccgtctgagtagactaatatatggtaac 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagagtgttcaggctggagaggaccaggaaaccgtctgagtagactaatatatggtaac 500
Query: 301 tctggaatgaactgaaacttcacatgacaatacctgattgaagcagccaattcaacagaa 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctggaatgagctgaaacttcacatgacaatacctgattgaagcagccaattcaacagaa 560
Query: 361 aacattcctgggataaaagaactttgaggctaccggg-aatttgtcttatcttgcatgga 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 aacattcctgggataaaagaactttgaggctaccggggaatttgtcttatcttgcatgga 620
Query: 420 atatactggcagaaacgtcctgctctccatcagag 454
|||||||||||||||||||||||||||||||||||
Sbjct: 621 atatactggcagaaacgtcctgctctccatcagag 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
