Query= MSMg01no462_g08.b1 MSMg01no462_g08.b1 CHROMAT_FILE:
MSMg01no462_g08.b1 PHD_FILE: MSMg01no462_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:24 2005
(244 letters)
>mm_chr17_24324617_24325260
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 tcttactctaccagtggcttccgctggaattacctgtcgggagcttagcctttaggctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcttactctaccagtggcttccgctggaattacctgtcgggagcttagcctttaggctgc 285
Query: 61 cggtcggatgaagatgaagctgatttagaacttcttcctcgggactggggcgtggcccgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cggtcggatgaagatgaagctgatttagaacttcttcctcgggactggggcgtggcccgg 225
Query: 121 tggtacagtgttccatccagcataggtttctctgtatagccctggctgtcctggaactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tggtacagtgttccatccagcataggtttctctgtatagccctggctgtcctggaactca 165
Query: 181 ctctgtagaccaggctggccttgaactcagaaaatccgtctgcctctgcctcccgagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctctgtagaccaggctggccttgaactcagaaaatccgtctgcctctgcctcccgagtgc 105
Query: 241 tggg 244
||||
Sbjct: 104 tggg 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_g08.g1 MSMg01no462_g08.g1 CHROMAT_FILE:
MSMg01no462_g08.g1 PHD_FILE: MSMg01no462_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:24 2005
(274 letters)
>mm_chr17_24209441_24210114
Length = 674
Score = 484 bits (250), Expect = e-141
Identities = 268/280 (95%), Gaps = 12/280 (4%)
Strand = Plus / Plus
Query: 1 aatacaaataattcatttattagaattaaactgacacctttgaacatttctactcaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatacaaataattcatttattagaattaaactgacacctttgaacatttctactcaggtg 260
Query: 61 gtaccttctaagagatgccgtgcctgtccttatgaatgagaaggataaagcacaaactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaccttctaagagatgccgtgcctgtccttatgaatgagaaggataaagcacaaactct 320
Query: 121 gcaaatcactggaaaaagggtagtcactgtgtcaacccccatggcctacgttaatttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaatcactggaaaaagggtagtcactgtgtcaacccccatggcctacgttaatttaga 380
Query: 181 cgtctggaatgtgaaaagaccagatgaatgcaaagggttctcaggttccaaagccagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtctggaatgtgaaaagaccagatgaatgcaaagggttctcaggttccaaagccagcaa 440
Query: 241 at--ttttttttgg----tggtggtcacacaccctgggca 274
|| || || ||||||||||||||||||||||
Sbjct: 441 atagtt------gggcggtggtggtcacacaccctgggca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
