Query= MSMg01no462_n04.b1 MSMg01no462_n04.b1 CHROMAT_FILE:
MSMg01no462_n04.b1 PHD_FILE: MSMg01no462_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:57 2005
(485 letters)
>mm_chr17_75661047_75661931
Length = 885
Score = 719 bits (372), Expect = 0.0
Identities = 387/392 (98%)
Strand = Plus / Minus
Query: 7 gaattcagtcattttgccagagtgcagtgctgggccatatggctttagtctgttctcaaa 66
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaattcagtcattttgaaagagtgcagtgctgggccatatggctttagtctgttctcaaa 333
Query: 67 tgagaactgacacagaatactttttaatatacttcttagtcatttaaaggtcaatccttc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgagaactgacacagaatactttttaatatacttcttagtcatttaaaggtcaatccttc 273
Query: 127 ctctacaatgcaaacacttacagagagtgttactggtttggggtattgctgccctcttcg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctctacaatgcaaacacttacagagagtgttactggtttggggtattgctgccctcttcg 213
Query: 187 ttttgctttattttgtttgaaatgaggttttactctgtagtgccagactagcctcgaatt 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 212 ttttgctttattttgtttgaaatgaggttttactctgtagtgccagactagccttgaatt 153
Query: 247 cattgtgtagcccaggctggcctcaaactcacagaatcctcctgttttaccatcctaaaa 306
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cattgtatagcccaggctggcctcaaactcacagaatcctcctgttttaccatcctaaaa 93
Query: 307 cctaggactttgggtgtaagccaccatgctcatatctatgagaatgttctatgaccctta 366
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 92 cctaggactttgggtgtaagccaccatgctcatatctatgagaatggtctatgaccctta 33
Query: 367 aagggagatgtggtatatttctacccagagag 398
||||||||||||||||||||||||||||||||
Sbjct: 32 aagggagatgtggtatatttctacccagagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_n04.g1 MSMg01no462_n04.g1 CHROMAT_FILE:
MSMg01no462_n04.g1 PHD_FILE: MSMg01no462_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:57 2005
(448 letters)
>mm_chr17_75494132_75494980
Length = 849
Score = 808 bits (418), Expect = 0.0
Identities = 442/450 (98%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 1 atatcatggttaaataattctagactggctctttggagtggcttggacattatttttgtc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatcatggttaaataactctagactggctctttggagtggcttggacattatttttgtc 260
Query: 61 acttataatgttaggagccatatgaaaatgacccagggaaggggctgttcaaccaagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttataatgttaggagccatatgaaaatgacccagggaaggggctgttcaaccaagtgt 320
Query: 121 cagggagtgtaggacattccttgagtgctctggagaaacttgtcttctgtctgtccttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggagtgtaggacattccttgagtgctctggagaaacttgtcttctgtctgtccttta 380
Query: 181 gcaccccatctggggacatgtgctct-gagtggtgcctctgttttctgctttgtcttttg 239
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gcaccccatctggggacatgtgctcttgagtggtgcctctgttttctgctttgtcttttg 440
Query: 240 ttcccagtctggtc-tttcagtcttgtcatttgtgtcctctgggaagtctctagctctcc 298
||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcccagcctgatcattt-agtcttgtcatttgtgtcctctgggaagtctctagctctcc 499
Query: 299 caagcacgtgtttctagagtactcacgggtgtgttctgaggctgagttcgcctttgtatt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 caagcacgtgtttctagagtactcacgggtgtgttctgaggctgagttcgcctttatatt 559
Query: 359 ttgtaattgagcttttctcaataagacagagtagaagtctgttcagaagccgggcagtgg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtaattgagcttttctcaataagacagagtagaagtctgttcagaagccgggcagtgg 619
Query: 419 tggtgcatgcttttaatctcagcacttggg 448
||| ||||||||||||||||||||||||||
Sbjct: 620 tggcgcatgcttttaatctcagcacttggg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space: 367482
Effective search space used: 367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
