Query= MSMg01no466_f01.b1 MSMg01no466_f01.b1 CHROMAT_FILE:
MSMg01no466_f01.b1 PHD_FILE: MSMg01no466_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:45 2005
(169 letters)
>mm_chr17_7346495_7347063
Length = 569
Score = 313 bits (162), Expect = 3e-90
Identities = 162/162 (100%)
Strand = Plus / Minus
Query: 1 caggactctaatagcagctaagggtaaaccacggtgaccatggcagtgtgctccctcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caggactctaatagcagctaagggtaaaccacggtgaccatggcagtgtgctccctcttg 261
Query: 61 cttcaagcatagctgacccactccttagtacacaaagacaatgttccaaaatcatcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttcaagcatagctgacccactccttagtacacaaagacaatgttccaaaatcatcttat 201
Query: 121 ctccttctccttctctgcttcctcctcctcctcctcctcctc 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctccttctccttctctgcttcctcctcctcctcctcctcctc 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no466_f01.g1 MSMg01no466_f01.g1 CHROMAT_FILE:
MSMg01no466_f01.g1 PHD_FILE: MSMg01no466_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:45 2005
(316 letters)
>mm_chr17_7168685_7169400
Length = 716
Score = 603 bits (312), Expect = e-177
Identities = 315/316 (99%)
Strand = Plus / Plus
Query: 1 tcttggactggaatatgtcatttctttactattaaaaatgtgtctgaaatcatggggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttggactggaatatgtcatttctttactattaaaaatgtgtctgaaatcatggggatg 260
Query: 61 ttagtctggctactggagcactagcaccttctcagtagacggggagcatcaggcaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagtctggctactggagcactagcaccttctcagtagacggggagcatcaggcaggtag 320
Query: 121 agaacggacgggatgttgtgggtggccagcctgtgaggctccttagatgctttcagactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaacggacgggatgttgtgggtggccagcctgtgaggctccttagatgctttcagactg 380
Query: 181 tgcgtgtgatgtggctgctggggaaggggtacatcactcttcccctgctaggacactcgg 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcgtgtgatgtggctgccggggaaggggtacatcactcttcccctgctaggacactcgg 440
Query: 241 cagagtgcactgaaagtgctgagttcattatttccatgaagagtctcgcactaggttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagagtgcactgaaagtgctgagttcattatttccatgaagagtctcgcactaggttgtg 500
Query: 301 gatggtggttaaagtt 316
||||||||||||||||
Sbjct: 501 gatggtggttaaagtt 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|