ATAATTTGGCGGCGCTATACGACTCACTAATCCGAGAGGATCCGCGGAAT
TCTCCTTCTTGCGCAATAAGTTTACATAATACTTACTATTTAAATTGATT
TCTTTCTATTATTCTCTGAGCCCAAAAATTTATTTGTATGTAGTTCGATG
TTTCACCAATTCAAAACATGCCCTAAAACATATCTGATTACACTTTAATC
ACATGGATGAGGTCTTCAAGACTACTCTTTATTCATAAATATTCTATAGA
TAACCCTCACTATTTAACCTTTATGAAAACCATTACTCATTTTTATTAGG
ATTATACAATTCAGTAATTTTAAGTACAAGCAAGCTAATTTTCAGATAAA
ATTTAGGAGTGCAAATTTATTTTTGAAATAAATGAGGAAAAATATGAAGT
AGCACAGATATTAGCATTACCTTTGCCCTCAACAATACCCAAATAAGAGA
GGTCGTATATGTGTTGCCTACACATAAAAATATTATAACAAATTGGAACT
TGGGGATTTTGTTAGAGAACCTATAGCTCTTGGAAAACATCACCCTAAGA
ATTTAACTTTATTTTTCCACGTGATATAACTTTCTTTTTTTTTTCCATTT
TTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCC
CCATATTTTTTTATTTCCCACTCCTTTACCCCTTATTTTTTTCTCCTTTT
TTCTTGTTCTCCCCCTTTTTCTGCCTTTTTTATTTTGTATCCTTTTCCCC
GTTCCTTTTTTTCCTTCTA

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCATGAAGGAGGGGGGATGTTAAAATGTGT
AGTAATATCAGGGTCCTTTCAGGAAAATCTTGCTGGCATATGCAATGGTA
TCAGCGTTTGGAGGCTGATTATGGGATAGCTGTCTCGTGTGAGGCTATGC
CGATGCCTGGCAAACACAGAAGTGGATACTCACAGTCAGCTATTGGTTGT
ATCACAGGGCACCCAATGGAGGTGCTAGAGAAAGTACCCAAGGAGCTAAA
GTGGACTGCAACCCTACATCTTTTCAATATGAACTAATCAGTACCCCCGG
AGTTTGTGTTTCTAGCTGCATATGTAGCAAAAGATGGCCTTAGTCCGCCT
TCATTGGTACCAGAGGCTCCTTGTCCCGGCTAACTCTATATGCCTCTTTA
CACCCGTTTATCCCTCTCCTCTATTGTCATTGTTCCCCCTTCCTTTACCC
CCCCTTTCCTTTCCCCCTTTTTCCCCCTTCTTTCTTCCTCCTTCCCTCCC
TCCCTTTCTTCTTTTCCTCCCCCCCTTTCCCCCTTTTTCCCCCCTTTCTT
TTTCTTCCCCCTTTTCTCCTTTTCCTTCTCCCTTCCCTCTTTCCCCCTTT
CCCCCTCCCCCCTCTTTCTTTTTCCTCTTCTTTCCCTCTCTTTTCCTCTT
CCTCCTTTTCTCTCCTCTCCCTCCTTTTCCCCCCCCCCTTTCTCTTTTTT
TCGCCCCTCCCTCTTTTTCCCCTTTCCCCCCG

Query= MSMg01no476_g18.b1 MSMg01no476_g18.b1 CHROMAT_FILE:
MSMg01no476_g18.b1 PHD_FILE: MSMg01no476_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:31 2005
         (565 letters)



>mm_chr17_60308354_60309317
          Length = 964

 Score =  936 bits (484), Expect = 0.0
 Identities = 511/520 (98%), Gaps = 1/520 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagtttacataatacttactatttaaattgatttctttctattattctctgagcccaaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 717 aagtttacataatacttactatttaaattgatttctttctattattctctgagccc-aaa 659

                                                                       
Query: 61  atttatttgtatgtagttcgatgtttcaccaattcaaaacatgccctaaaacatatctga 120
           ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 658 atttacttgtatgtagttcgatgtttcaccaattcaaaacatgccctaaaccatatctga 599

                                                                       
Query: 121 ttacactttaatcacatggatgaggtcttcaagactactctttattcataaatattctat 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttacactttagtcacatggatgaggtcttcaagactactctttattcataaatattctat 539

                                                                       
Query: 181 agataaccctcactatttaacctttatgaaaaccattactcatttttattaggattatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agataaccctcactatttaacctttatgaaaaccattactcatttttattaggattatac 479

                                                                       
Query: 241 aattcagtaattttaagtacaagcaagctaattttcagataaaatttaggagtgcaaatt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 478 aattcagtaattttaagtacaagcaagctaattttcagataaaatttaggagtgcatatt 419

                                                                       
Query: 301 tatttttgaaataaatgaggaaaaatatgaagtagcacagatattagcattacctttgcc 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 418 tatttttgaaataaatgtggaaaaatatgaagtagcacagatattagcattacctttgct 359

                                                                       
Query: 361 ctcaacaatacccaaataagagaggtcgtatatgtgttgcctacacataaaaatattata 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 ctcaacaatacccaaataagagaggtcgtatatgggttgcctacacataaaaatattata 299

                                                                       
Query: 421 acaaattggaacttggggattttgttagagaacctatagctcttggaaaacatcacccta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acaaattggaacttggggattttgttagagaacctatagctcttggaaaacatcacccta 239

                                                   
Query: 481 agaatttaactttatttttccacgtgatataactttcttt 520
           |||||||||||||||||||||| |||||||||||||||||
Sbjct: 238 agaatttaactttatttttccatgtgatataactttcttt 199


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space:   529470
Effective search space used:   529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)