Query= MSMg01no479_a24.b1 MSMg01no479_a24.b1 CHROMAT_FILE:
MSMg01no479_a24.b1 PHD_FILE: MSMg01no479_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:55 2005
(603 letters)
>mm_chr17_26328869_26329872
Length = 1004
Score = 1131 bits (585), Expect = 0.0
Identities = 597/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 4 gaattccccaagatt-tctacagcagagccacccactgctactgtccatgtctgataccc 62
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccccaagatactgtacagcagagccacccactgctactgtccatgtctgataccc 263
Query: 63 acatcatcttcaggaagtttgtgatgaaagtgtaaggaagagccacgtttctgtcctggc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acatcatcttcaggaagtttgtgatgaaagtgtaaggaagagccacgtttctgtcctggc 323
Query: 123 agatcctctttaagaaccgttagcctgcagaagacatctaagcaaggggtgaagtgacag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatcctctttaagaaccgttagcctgcagaagacatctaagcaaggggtgaagtgacag 383
Query: 183 ctttagcacctagatcagcagttctccagagtgtattccagagaacacctgacgttgacc 242
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctttagcacctagatcaacagttctccagagtgtattccagagaacacctgacgttgacc 443
Query: 243 ctgtgtctagatagatacctaatggcagggcctctgatagtatgtgagtacgagtttttg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtgtctagatagatacctaatggcagggcctctgatagtatgtgagtacgagtttttg 503
Query: 303 atggctaggtcctgctgctcatcctttctgtgcctattgtccacaacactggctgagccc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atggctaggtcctgctgctcatcctttctgtgcctattgtccacaacactggctgagccc 563
Query: 363 catcctctttgatgcgggttgttccctaggtatgtgcaggcagtcatgcagcggggacgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catcctctttgatgcgggttgttccctaggtatgtgcaggcagtcatgcagcggggacgc 623
Query: 423 acctgtgtcaggccagcttgtgcaccggtgctgagtgtggtaccagccgtgtcggacttg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acctgtgtcaggccagcttgtgcaccggtgctgagtgtggtaccagccgtgtcggacttg 683
Query: 483 gaactctccgagacagagtatgtgcaccctgtgggtcctcctggttttgcccagctcagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaactctccgagacagagtatgtgcaccctgtgggtcctcctggttttgcccagctcagc 743
Query: 543 ccaggccaggccaaattccaaagtggaacacctattttgataggttttgtcactgagcca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccaggccaggccaaattccaaagtggaacacctattttgataggttttgtcactgagcca 803
Query: 603 g 603
|
Sbjct: 804 g 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_a24.g1 MSMg01no479_a24.g1 CHROMAT_FILE:
MSMg01no479_a24.g1 PHD_FILE: MSMg01no479_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:55 2005
(558 letters)
>mm_chr17_26535373_26536330
Length = 958
Score = 774 bits (400), Expect = 0.0
Identities = 415/420 (98%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 140 caaacatggacagttccacctgaacatgtacacacatgtgaatgtgcatggacacacact 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 caaacatggacagttccacctgaacatgtacacacatgtgaatgtgcatggacacacact 899
Query: 200 gtgaatgtgaacggacacacgttgtaaatgtgcacatgcgccatatggcct-gggggacc 258
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 898 gtgaatgtgaacggacacacgttgtaaatgtgcacatgcgccatatggcctggggggacc 839
Query: 259 catctgctctcagcagctgtgtgaccttggacaagatagatcacctgcctgagcctcatt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 catctgctctcagcagctgtgtgaccttggacaagatagatcacctgcctgagcctcatt 779
Query: 319 gcctttatctacaaaatgggaccgctggagcctctgactgtacagtccatgggagaccaa 378
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 778 gcctttatctacaaaatgggaccgctagagcctctaactgtacagtccatgggagaccaa 719
Query: 379 gtaaacactgggtgattagcccaaggcctggtcctcagtgggtattcagtaactgacacc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gtaaacactgggtgattagcccaaggcctggtcctcagtgggtattcagtaactgacacc 659
Query: 439 tgtcactgtccctctgaaggagccactgagccacatgcccctggcacctgatctcccagg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgtcactgtccctctgaaggagccactgagccacatgcccctggcacctgatctcccagg 599
Query: 499 tctcctcagccctctgattcagattagtgtggtcaccaaaaacctcacacagctagctcc 558
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 598 tctcctcagccctctgattcagatcagtgtggtcaccataaacctcacacagctagctcc 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
