ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGAGGATCCGCGGAA
TTCCCAAATGTTTCTGGAAGCTAGAAGTCCAAGACCAAGGTGTCAGAAGG
ATCATATTCCTCCGATGCCTCGCTTCTCTGTCAGGGGATCTGCTCTCATG
GCTCTTCATAGGAAAGCCACGGGTCTCTGTGTCCTGATCTTTTCTGATGA
TAACAGATTGGATAAGGGCTCACACTCAGAGCCTTGATTTTAATCACCTC
TTTAAAGGCCCCATGTCCTGTCGCAGACGTAAAACACTAGCTTCAGAAAA
ATGAATTTTAGGGATACAATTTGGCCCATACTATTCCACCCTCTATAGTC
ACCAAACACAAGTTATATGCCTAAAACATTTAGGTTAACTTCACAGACCA
AAAGGCTCCAGGGCTGTCAGACTTTTTGACTCTGAGACAAGACTTTGTCA
TTTACAGATATGCTCATCTGTATTCATAGTTCTTTGAGATGTGTGAGGTA
CATAGGCTGCCAGATTGGATGCTGTGACTCTTCTCATTCTAGTTTCTACA
TTGCGTCATAGGATGTACCCAGGTCCCAGGCTACTGGTCCAGAGGCAGAG
GAGGGGCAGTGCCATAAAGATGAGGCTGGGAGATGGAATGCAATTACCAA
GTCTGGGGACTTTTCAGTCTAATCTTTGAATGGGGCTGGTGACACTGTGT
TATCCCGACACTAAGATCTCTCAGACTAATGCCTGCCTCCAGACAGGGAC
TAACCAAGCTTGGCTTGTGAAGACAGGCGATATGAN

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTACTTATGTTTATATTCCATTT
TTAAATTGGGTTCTATGTTTTCTTGATATCCAGTTTTTTTGAGCTCTTAA
TATGTTTTGGATATTAGCCCTCTGTCAGATATGTAGCTGGTAAAAAAAAA
ATTACTTCCATTCTGTAGGCTGCCGTTTTATCTGAATGATGGTGTCCTTT
GCCATACTGAAGTTTTCATCAGATCATTTCTTAATTGTTGTTCTTGGTTT
GGAGAAATGGCTCAGCCATTAATGTTTCATGCTTACAACCAAAAATATTA
ATTAGGTATTCTCTTTATTTACATTTCAAATACTATCCCCAAAGTTCCCT
ATACCCTCCCCCCACCCTGCTCCCCTACCCACCCACTCCCACTTCTTGGC
CCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCTAGGGGC
CTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGC
TAGAGACACGAGCTCTGGGGTTACTGGTTAGTTCATATTGTTGATCCACC
TATCAGGTTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTC
CATTGGGGGCCCTGTGTTCCATCCAATAGATGACTGTGAGCATCCACTTC
TGTATATGTCAGGCACTGGCCTAGCCTCACACGAGACAGCTATATCAGGG
TCCTTTC

Query= MSMg01no479_i22.b1 MSMg01no479_i22.b1 CHROMAT_FILE:
MSMg01no479_i22.b1 PHD_FILE: MSMg01no479_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:36 2005
         (529 letters)



>mm_chr17_48972482_48973410
          Length = 929

 Score =  861 bits (445), Expect = 0.0
 Identities = 460/465 (98%)
 Strand = Plus / Minus

                                                                       
Query: 65  tcaggggatctgctctcatggctcttcataggaaagccacgggtctctgtgtcctgatct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tcaggggatctgctctcatggctcttcataggaaagccacgggtctctgtgtcctgatct 870

                                                                       
Query: 125 tttctgatgataacagattggataagggctcacactcagagccttgattttaatcacctc 184
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tttctgattataacagattggataagggctcacactcagagccttgattttaatcacctc 810

                                                                       
Query: 185 tttaaaggccccatgtcctgtcgcagacgtaaaacactagcttcagaaaaatgaatttta 244
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 809 tttaaaggccccatgtcctgtcgcagacgtagaacactagcttcagaaaaatgaatttta 750

                                                                       
Query: 245 gggatacaatttggcccatactattccaccctctatagtcaccaaacacaagttatatgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gggatacaatttggcccatactattccaccctctatagtcaccaaacacaagttatatgc 690

                                                                       
Query: 305 ctaaaacatttaggttaacttcacagaccaaaaggctccagggctgtcagactttttgac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ctaaaacatttaggttaacttcacagaccaaaaggctccagggctgtcagactttttgac 630

                                                                       
Query: 365 tctgagacaagactttgtcatttacagatatgctcatctgtattcatagttctttgagat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctgagacaagactttgtcatttacagatatgctcatctgtattcatagttctttgagat 570

                                                                       
Query: 425 gtgtgaggtacataggctgccagattggatgctgtgactcttctcattctagtttctaca 484
           ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 569 gtgtgaggtacatgggctgccagattggatgctgtgactctcctcattctagtttctaca 510

                                                        
Query: 485 ttgcgtcataggatgtacccaggtcccaggctactggtccagagg 529
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 509 ttgcgtcataggatgtacccatgtcccaggctactggtccagagg 465


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)