NGACCGGCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGG
ATCCGCGGAATTCATTTGGCTTACTGTTCTACATGGTTGAGAGACCAACA
TGGCAGGGAGGCATAGCAACAAGGAGCAAGCCTGGCAGCAGGAGCTGGAA
GCTGACAGGTCCTATATCCCAATCACAAGGCTGAGAGGGCAAACTGGAGG
TGGTTTTTAGCTTTAAACTCATTATTAGCCTGTCCACAGTGATTACATGT
TCCAGCAAAGCCATGCCACACTTTCTAAGAATACCCCAACAGCACCAACT
AGGGAACAAATGCTCAAATATATGAGTCTACGGTAGACATACACATTTAA
ACCACTATTAAAAACCAACACACAAACAAACAAAAACAAAAACAAAAAAT
GCTACCTATAAACAAGAATAATGTGGTTTCATTGTTTTTAATTGTCAAGA
CTGAAAGGGAATAAAATGCTCTCCCTGCCTGGATGGTATGAATGGGTCTT
CCAATGGTAAAATAAAGTGGTAAAGAGGCATCCTTCTCTTGTTGCACAAG
GCACACAAGACCTTCTCGACACAGCAATGCTAAACTGTCATCTGCAAAGT
TTATTTTCAAGAAATGTACAAGCAAGTAATAAAAAATAATCTTTCCCTAA
AATAATAGTGTTTTAAGTTTATAACTTTGTATTGCGCTACTTTTATACCA
ATCTTGTAGTCTATAGCCTGCTAGATC

NNNNCACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTTTTCTAATCCTCAGTTG
TCTCCATCACTTCATTACTCAGGCATTGGTTTTCTGTAAGTTCATTCTTA
GTTCATTGTTTCTTTATGTAGTTTTCAAACTGTTTGATTAAGTTTATGAA
TGTGTATGAAGTTCTGTGTTGTGTGGTTCATCTAAGCAATTATCACTGGA
GATATAGATATAGGATTTATGGATTTTTTAGGGGGGAGGTGGGTGATACT
GTCTTCTTTCATATTATTTTTATTTTTCTGGTGATTTTACATGTGGACTT
TTTTCTGTTGGTTTTGTGTCTGATATGGATGTGATATATGGAGTGGGGCC
AGAGTACAGGTTATGTGAGTCGGATTGGGCCTGAAAATTGGATGTGATAG
TGTGAAGTTGAGAGGACACAGGGACCTGCACTAGCAGTTGCTTCCTGCTC
TAAGCCTGGAGGTTGGTGTGGCTAGTCAAACTAGGCTTGAGTGCTGGGTG
TACAACCCCTGCTATGCTGAGAATTGAGGAGGTTGCATTGGATGGAAGGA
TCTGGTGGCTTTACTAGGCTAGGTCCTGGCACAAATTGCCTGGGTCTATA
CTGGGATGGTGAGGCATGGGGGAAAGTTGGGTTTTTCCTTAATTTTTTTT
CTACCCTCTTTTCTTTTAGTTCTCTTTGGC

Query= MSMg01no485_k12.b1 MSMg01no485_k12.b1 CHROMAT_FILE:
MSMg01no485_k12.b1 PHD_FILE: MSMg01no485_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:41 2005
         (529 letters)



>mm_chr17_51148917_51149845
          Length = 929

 Score =  934 bits (483), Expect = 0.0
 Identities = 514/529 (97%), Gaps = 9/529 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctacatggttgagagaccaacatggcagggaggcatagcaacaaggagcaagcctggca 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tctacagggttgagagaccaacatggcagggaggcatagcaacaaggagcaagcctggca 269

                                                                       
Query: 61  gcaggagctggaagctgacaggtcctatatcccaatcacaaggctgagagggcaaactgg 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 270 gcaggagctggaagctgacaggtcctatatcccaatcacaaagctgagagggcaaactgg 329

                                                                       
Query: 121 aggtggtttttagctttaaactcattattagcctgtccacagtgattacatgttccagca 180
           |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||
Sbjct: 330 aggtggtttttagctttaaactcatta---gcctgtccacagtgattacatgttccagca 386

                                                                       
Query: 181 aagccatgccacactttctaagaataccccaacagcaccaactagggaacaaatgctcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagccatgccacactttctaagaataccccaacagcaccaactagggaacaaatgctcaa 446

                                                                       
Query: 241 atatatgagtctacggtagacatacacatttaaaccactattaaaaaccaacacacaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atatatgagtctacggtagacatacacatttaaaccactattaaaaaccaacacacaaac 506

                                                                       
Query: 301 aaacaaaaacaaaaacaaaaaatgctacctataaacaagaataatgtggtttcattgttt 360
           |||||||||||||||      ||||||||||||||||||||||||||||||||||  |||
Sbjct: 507 aaacaaaaacaaaaa------atgctacctataaacaagaataatgtggtttcatcattt 560

                                                                       
Query: 361 ttaattgtcaagactgaaagggaataaaatgctctccctgcctggatggtatgaatgggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaattgtcaagactgaaagggaataaaatgctctccctgcctggatggtatgaatgggt 620

                                                                       
Query: 421 cttccaatggtaaaataaagtggtaaagaggcatccttctcttgttgcacaaggcacaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttccaatggtaaaataaagtggtaaagaggcatccttctcttgttgcacaaggcacaca 680

                                                            
Query: 481 agaccttctcgacacagcaatgctaaactgtcatctgcaaagtttattt 529
           |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 agaccttcccgacacagcaatgctaaactgtcatctgcaaagttcattt 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)