Query= MSMg01no488_b18.b1 MSMg01no488_b18.b1 CHROMAT_FILE:
MSMg01no488_b18.b1 PHD_FILE: MSMg01no488_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:55 2005
(646 letters)
>mm_chr17_56858958_56860009
Length = 1052
Score = 1174 bits (607), Expect = 0.0
Identities = 633/645 (98%), Gaps = 6/645 (0%)
Strand = Plus / Minus
Query: 5 ggagttgaagtggcccagaaaagtagcctagggtggcccagcatagctggtcatggggca 64
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 849 ggagttgaagtggcccagaaaagtagcccaaggtggcccagcatagctggtcatggggca 790
Query: 65 gtgggtctggccgctcaactcttctccagcctctggggatgtcacacaca------ctgg 118
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 789 gtgggtctggcccctcaactcttctccagcctctggggatgtcacacacacccttcctgg 730
Query: 119 tgagctctggagctctgatttgagcaccgagcacttacagatcttgagtttcagtatcaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgagctctggagctctgatttgagcaccgagcacttacagatcttgagtttcagtatcaa 670
Query: 179 cacagactgaagaccctagcagggcctcaaagatgaggctgggcactgggctggaggcct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cacagactgaagaccctagcagggcctcaaagatgaggctgggcactgggctggaggcct 610
Query: 239 tgaagacattgtagctccccagcccagccatccctttgcctcagcatcactgtggcttct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgaagacattgtagctccccagcccagccatccctttgcctcagcatcactgtggcttct 550
Query: 299 gtgtacacgcacagggtgcgagaaagctcacacgggaacccaacctcactgttggaggtt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgtacacgcacagggtgcgagaaagctcacacgggaacccaacctcactgttggaggtt 490
Query: 359 gctgaaatgtctttcccagatgcagcaggacttgaacccaggggcactgggattcttgat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctgaaatgtctttcccagatgcagcaggacttgaacccaggggcactgggattcttgat 430
Query: 419 ggggactggtgaggccacagggaccctgggtgactttggtgaccacacctaacaagccag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggggactggtgaggccacagggaccctgggtgactttggtgaccacacctaacaagccag 370
Query: 479 atgtcatgggacccagagtgactgcccttcaccatctaactgctcccttgtggtgattct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgtcatgggacccagagtgactgcccttcaccatctaactgctcccttgtggtgattct 310
Query: 539 cccatggcccagccaaaccacagccaagcctcagcaccacctgtaatatgggaccctcca 598
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 309 cccatggcccagccaaaccacagccaagcctcagcaccacctgtaacatgggaccctcca 250
Query: 599 ggagtaccacctgcagcatgggaccctccaggagcacctcctgca 643
|||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 249 ggagtaccacctgcagcatgggaccctccaggagtaccacctgca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1052
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1042
Effective search space: 662712
Effective search space used: 662712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b18.g1 MSMg01no488_b18.g1 CHROMAT_FILE:
MSMg01no488_b18.g1 PHD_FILE: MSMg01no488_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:55 2005
(383 letters)
>mm_chr17_56703440_56704222
Length = 783
Score = 694 bits (359), Expect = 0.0
Identities = 377/383 (98%)
Strand = Plus / Plus
Query: 1 aagcaggaaagtgcttgggaggctaaggcaggaggactgtgtggaaccccagcctgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcaggaaagtgcttgggaggctaaggcaggaggactgtgtggaaccccagcctgtgtt 260
Query: 61 ccacctcaaaccacctaaccacgagtgctcctactgcctgtcaatgcattgacaggctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ccacctcaaaccacctaaccacgagtgctcctactgcctgtcaatgcattgacgggctcc 320
Query: 121 taatgcagtggagattcacaccctgttgccatgcacagaacagggacaaggttcacacct 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactgcagtggagattcacaccctgttgccatgcacagaacagggacaaggttcacacct 380
Query: 181 gccatcatagtctctatggtgcagccaaggatagcaagtgcgttcattgttccctctgag 240
|||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 381 gccatcatagtctctatggtgcagccaaggatagcaggagctttcattgttccctctgag 440
Query: 241 aacaccccagaaacccatctcaggttcctcctatatagaatacttacctggggggagggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaccccagaaacccatctcaggttcctcctatatagaatacttacctggggggagggg 500
Query: 301 gtagcccttggccttcattcaacttcttgtcagagatgtagccatgccagccgtctccgg 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 gtagcccttggccttcattcaacttcttgtcagagctgtagccatgccagccgtctccgg 560
Query: 361 aatcccaagcatggtgctctagg 383
|||||||||||||||||||||||
Sbjct: 561 aatcccaagcatggtgctctagg 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
