NNNTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATTGAATCTTTTTTTTTTAATATCATTTTTTTTCCAT
TTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGT
CCCCCATATCCACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTT
GGCCCTGGTGTTCCCCTGTACTAGGGCATATAAAGTTTGCAAGTCCAATG
GGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGT
AGCTAGAGTCAAGAGGTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCA
CCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCC
TCCATTGGGAGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACT
TCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTG
GGTCCTTTCGATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCTTTTGG
ATGCTGGTTATGGGGTGGATCCCTGGATATGGCAGTCTCTACATGGTCCA
TCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTG
TTTTGTTCCCAAATCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCA
TTCTTGAGTTTCATGTGTTTAGCAAATTATATCTTATATCTT

AAAANCCAAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGATTAAATAACCCTTTCA
CAGGCATGCACTGTGTGTAAAAATATAACACCATTATTTCAATTACCATT
GGAAATACAGTAGAGTAAAAGTTAATATAACTGCAGCTACTTAGAATTCA
CACTTTTAGAACTTTGTAGAAAATAAATACAGGGAATACGGGGATGGATA
TAAGAAATAGTAGGTACTCTTATAGTGTCTAGAAGATTCTGTTCATTGAC
TGAGATTACTTAACTGTTGACAGTATCAACTACAATAGATAAAGCTTACA
AGATGAATATAAAACATCTTAATCTAATATTACTAAGCATAAATGAAGTT
ACAAATTTCTCCTTACATGAGAATTAGACAAATGCATCTCTTTGCCCCTG
ACATACAACAAGACTCGCATTCAACAAACAATGTGATTTATATGGGTACA
ATTAAGTATAGGAATCATGGTCAGTAGATAATGACATTGAAAATTCAGGA
CTGTGCAGAGCAATACTGTAATAACTTTTATCTCTAGAGTAACCACAGTA
TGTTAAGACACTTTAGAAGATTGTAACTTGATCTTATTATAAATGTATAT
TCCATATTTGTTTTAATTAAACATTTATATAAAATTAGTGTGTACACAAA
AATACAAATATTGTGCTTATGTTTTTATATTAACCACTCTN

Query= MSMg01no489_d02.g1 MSMg01no489_d02.g1 CHROMAT_FILE:
MSMg01no489_d02.g1 PHD_FILE: MSMg01no489_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:20 2005
         (660 letters)



>mm_chr17_77226950_77228009
          Length = 1060

 Score = 1253 bits (648), Expect = 0.0
 Identities = 657/660 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgattaaataaccctttcacaggcatgcactgtgtgtaaaaatataacaccattattt 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgattacataaccctttcacaggcatgcactgtgtgtaaaaatataacaccattattt 260

                                                                       
Query: 61  caattaccattggaaatacagtagagtaaaagttaatataactgcagctacttagaattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caattaccattggaaatacagtagagtaaaagttaatataactgcagctacttagaattc 320

                                                                       
Query: 121 acacttttagaactttgtagaaaataaatacagggaatacggggatggatataagaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacttttagaactttgtagaaaataaatacagggaatacggggatggatataagaaata 380

                                                                       
Query: 181 gtaggtactcttatagtgtctagaagattctgttcattgactgagattacttaactgttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggtactcttatagtgtctagaagattctgttcattgactgagattacttaactgttg 440

                                                                       
Query: 241 acagtatcaactacaatagataaagcttacaagatgaatataaaacatcttaatctaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtatcaactacaatagataaagcttacaagatgaatataaaacatcttaatctaata 500

                                                                       
Query: 301 ttactaagcataaatgaagttacaaatttctccttacatgagaattagacaaatgcatct 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttactaagcataaatgaggttacaaatttctccttacatgagaattagacaaatgcatct 560

                                                                       
Query: 361 ctttgcccctgacatacaacaagactcgcattcaacaaacaatgtgatttatatgggtac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgcccctgacatacaacaagactcgcattcaacaaacaatgtgatttatatgggtac 620

                                                                       
Query: 421 aattaagtataggaatcatggtcagtagataatgacattgaaaattcaggactgtgcaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattaagtataggaatcatggtcagtagataatgacattgaaaattcaggactgtgcaga 680

                                                                       
Query: 481 gcaatactgtaataacttttatctctagagtaaccacagtatgttaagacactttagaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaatactgtaataacttttatctctagagtaaccacagtatgttaagacactttagaag 740

                                                                       
Query: 541 attgtaacttgatcttattataaatgtatattccatatttgttttaattaaacatttata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741 attgtaacttgatcttattataaatgtatattccatatttgttttaattaaacatttcta 800

                                                                       
Query: 601 taaaattagtgtgtacacaaaaatacaaatattgtgcttatgtttttatattaaccactc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 taaaattagtgtgtacacaaaaatacaaatattgtgcttatgtttttatattaaccactc 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)