NGGCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGACGATCCGC
GGAATTCCAAAGCTTTACAGATTGCTAACAGTAATCTGCCCATAGGTTCG
GCAATTTAAAGGCAAGTGTGCTTGCAAAGATCCTCATCCAGGAAGGCATA
GAGACATCTCTGAGACTGTGTGACAGGCAGGCAGGATGAAGGGATGCAGG
CGAGGCAGAGCCAGTCTGGAATCCGTATGGTCCAGAGGCTGGATGACGTC
AGACATGGCTCTGGTGCTCCCTCTGTTATGGAACCAAGAACCCATTGGCT
TTTGTGGCCCTTCTTGCTTTGCTTTATGGGAGCCCTGTATCCCAGTGGGA
TAAAGAATTGGTTCACAGTGGACAGTTCTCCAAGACCCTTCTTCAAAACC
CTCTCTGGTAGTTTGTGAGTCTAAAAATATCCTGGACCCTGATGTCTGAA
GGTGACACTGTGTATCACAAACCCATGTGACCCGACAGTGAGCTCAGAGG
CTAGGAATCTCCCTGATCCTTTTCACACATAGCAGAGAGCCCAGTGCAGC
CAGAGGCGACACCCTGGTCTGGCATGTGCCTTTTTTTCTCCCAACTTACC
TCTGATTCAAGGATGGCAGGCCCTCTCCGACTGAAAGAGAAGTCTCGGTT
GCCATGAGCAGTGGGTTAGGCTGTTGAGATAGCTAGAAAAGACACACCAC
CTGACAGTTCACTCCACATGAGAAGTAGGTCAGAGACTCGCCAAGCGTGT
GATCTGCTCCCAGGTGAGTTTCAGGC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAGAGGAGCAAGCAGGAAA
GAGCCCTGGTACTCAACATGTACATATCATCATCATCATCATCATCATCA
TCATCATCGTCATCGTCATCATCATCGTCATCGTCATCGTTATCGTCATC
GTCATCATCATCATCATTATCATCATCTCTCACTCTCTGTGTGTGTGTGT
GTGTGTGTGCGCGCGCATGCGCGCGTCTCCCTCTTTGCCTCTCTCTGTCT
CTCTCACTCTGTGTGTGTAAGTGTGTCTTCCTCTTTGCCTCTCTCTCTGT
CTTCCTCACTCTGTGTATCATTCTCTCTCTCTCTCAGTCTCTCTCTCTCT
CTCCCCACTCCCCTTTCAGAAGATACTTTTCCCCTTACCATCCACTTTCA
GCTAATGGATGCTGTCTCATCTCAAAGTCTGGGGTTTTCTGGAGGGATAA
ACACAAATATGGGGTCCCATAAAACACCATTTCTTCTTCTAAAAGGAGCA
TGACTGGTATTCTGATTTGAGAAACTATCTTCTCGTCACGCGTGTCCATG
ACTTTGGCCATCGCGCTTCATCTTTCTGGTTCTTCATCGTGTCTTTACAG
GGAGAGGGTGGGCAAGGAGAATATTTGGTTTTGTGAACTGCAGACCAAGA
AGAGAGGCACTGTGGAGGCAGACAGGCCTCTTTGAGGTTGCTGTCACGGC
TCGCACATCCTCCCAGAA

Query= MSMg01no490_e14.b1 MSMg01no490_e14.b1 CHROMAT_FILE:
MSMg01no490_e14.b1 PHD_FILE: MSMg01no490_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:50 2005
         (618 letters)



>mm_chr17_72600696_72601713
          Length = 1018

 Score = 1164 bits (602), Expect = 0.0
 Identities = 614/618 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctaacagtaatctgcccataggttcggcaatttaaaggcaagtgtgcttgcaaagatcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gctaacagtaatctgcccataggttcggcaatttaaaggcaagtgtgcttgcaaagatcc 759

                                                                       
Query: 61  tcatccaggaaggcatagagacatctctgagactgtgtgacaggcaggcaggatgaaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tcatccaggaaggcatagagacatctctgagactgtgtgacaggcaggcaggatgaaggg 699

                                                                       
Query: 121 atgcaggcgaggcagagccagtctggaatccgtatggtccagaggctggatgacgtcaga 180
           ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atgtagacgaggcagagccagtctggaatccgtatggtccagaggctggatgacgtcaga 639

                                                                       
Query: 181 catggctctggtgctccctctgttatggaaccaagaacccattggcttttgtggcccttc 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 638 catggctctggtgctccctctgttatggaaccaagcacccattggcttttgtggcccttc 579

                                                                       
Query: 241 ttgctttgctttatgggagccctgtatcccagtgggataaagaattggttcacagtggac 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgctttgcttcatgggagccctgtatcccagtgggataaagaattggttcacagtggac 519

                                                                       
Query: 301 agttctccaagacccttcttcaaaaccctctctggtagtttgtgagtctaaaaatatcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 agttctccaagacccttcttcaaaaccctctctggtagtttgtgagtctaaaaatatcct 459

                                                                       
Query: 361 ggaccctgatgtctgaaggtgacactgtgtatcacaaacccatgtgacccgacagtgagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggaccctgatgtctgaaggtgacactgtgtatcacaaacccatgtgacccgacagtgagc 399

                                                                       
Query: 421 tcagaggctaggaatctccctgatccttttcacacatagcagagagcccagtgcagccag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcagaggctaggaatctccctgatccttttcacacatagcagagagcccagtgcagccag 339

                                                                       
Query: 481 aggcgacaccctggtctggcatgtgcctttttttctcccaacttacctctgattcaagga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aggcgacaccctggtctggcatgtgcctttttttctcccaacttacctctgattcaagga 279

                                                                       
Query: 541 tggcaggccctctccgactgaaagagaagtctcggttgccatgagcagtgggttaggctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tggcaggccctctccgactgaaagagaagtctcggttgccatgagcagtgggttaggctg 219

                             
Query: 601 ttgagatagctagaaaag 618
           ||||||||||||||||||
Sbjct: 218 ttgagatagctagaaaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no490_e14.g1 MSMg01no490_e14.g1 CHROMAT_FILE:
MSMg01no490_e14.g1 PHD_FILE: MSMg01no490_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:50 2005
         (588 letters)



>mm_chr17_72428417_72429404
          Length = 988

 Score =  799 bits (413), Expect = 0.0
 Identities = 428/433 (98%)
 Strand = Plus / Plus

                                                                       
Query: 156 tctctgtgtgtgtgtgtgtgtgtgtgcgcgcgcatgcgcgcgtctccctctttgcctctc 215
           ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 356 tctctctgtgtgtgtgtgtgtgtgtgcgcgcgcgtgcgcgcgtctccctctttgcctctc 415

                                                                       
Query: 216 tctgtctctctcactctgtgtgtgtaagtgtgtcttcctctttgcctctctctctgtctt 275
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 416 tctgtctctctcactctgtgtgtgtaagtgtgtctccctctttgcctctctctctgtctt 475

                                                                       
Query: 276 cctcactctgtgtatcattctctctctctctcagtctctctctctctctccccactcccc 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cctcactctgtgtatcattctctctctctctcagtctctctctctctctccccactcccc 535

                                                                       
Query: 336 tttcagaagatacttttccccttaccatccactttcagctaatggatgctgtctcatctc 395
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttttagaagatacttttccccttaccatccactttcagctaatggatgctgtctcatctc 595

                                                                       
Query: 396 aaagtctggggttttctggagggataaacacaaatatggggtcccataaaacaccatttc 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaagtctggggttttctggagggataaacacaaatatggggtcccataaaacaccatttc 655

                                                                       
Query: 456 ttcttctaaaaggagcatgactggtattctgatttgagaaactatcttctcgtcacgcgt 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttcttctaaaaggagcatgactggtattctgatttgagaaactatcttctcgtcacgcgt 715

                                                                       
Query: 516 gtccatgactttggccatcgcgcttcatctttctggttcttcatcgtgtctttacaggga 575
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtccatgactttggccatcacgcttcatctttctggttcttcatcgtgtctttacaggga 775

                        
Query: 576 gagggtgggcaag 588
           |||||||||||||
Sbjct: 776 gagggtgggcaag 788


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space:   565284
Effective search space used:   565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)