AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTCAGTTGAGGTTCCCTCTTCCTTTGTTAACAATTAAAAATTAAATT
GAAAAGTAATAAGCATAAGTGTGCAAATATCTTTGTAGAAGGATATAAAA
TCCTTTGGCATGAGCCCAGGAATGGTATAGATGGGTCATATGATAGTTAC
ATTCCAATTTCTTTTCAGGATAATTTTAATTGATTTCAATGTAGATACAG
TAATTTCCCTCCCACCAGCAATGTGTAAGAGCAGAAGCAATAATATTGAG
GTAATAATAATGTATATATAAAAAAAGTCACAAAGAAAAGGCTCAGAGTC
TAATGGATTCACTGCCAAGTTCTTAAAGAACTTGAAAGAACTGAGAGTAG
TACTATTTAAATTATTCCATAAAACAGAGAGAGAAAGTCTTCAGAAGTGG
TTTTACAAAACCTGTATTAAACTGAAAACAAAACCACTTAAAGACAGCAA
CTACAAGAAAAGAAAATGGACCTAAGGAGAATCTATTACTATTTTTTTTT
TAATCAACTTAGCTTCGCATCAAACTGCCTCCTAAATAATTACCTTTATA
AGCTCAGATTAGACTACCTCTCAATCCACATAAGAGACATTTCTTTGGAC
AGTGGATGGTGGTTACTACAGAGATTCACAATTTGCCAAGCCCCCANGGC
TCAGGGAGTACAGAGGCAGAGGGAGTAGTAAAACTGGAAAACAGAGCN

AATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATAATTTCCTTCATTCTATGAATCT
TGTTTTTCTTCACATGACCATAAATAAGAAATATATTACAACTAATATTA
GAAAATAAAGATCAGTAGCTATATGGCTTAATTCAAAACCTCCTCATCAC
TTGAAAAAGTGAACTAATATTCAGTATCTTACAGAAGAAATAACACCTGT
GTGATCTGTCTAACATTTGCACAGCCTAGAATTTCACATCGTACTCATGA
ACATTTGAAAATCTTAGTAACATACTCCATATTCTTTATTGGCAAGAACA
CATTGTAAATATTTGTAAGTGGATAGCATTGTTATTTTTATTATCAGCAT
GAATCCAAGTTAAAATTTTATTTTCAGCAACCACACTGATTTGGATTACT
GACATTTTTAAATTGATAATTTATATTGAGAAATCTTATGGATAATATTT
TGATATGTTTTATGCTAGATGAAAACAACATCATAAGAAATCATACTTTT
GTGGCATGGCTAACATAGTATTACAGAATAATTTGTAGGTGTGTTTGTAT
TTGAAATGAATTTAATAAATTTTCATCAGCATTAAAATAAGTAATTATTT
AAAGACAAAGCAGTCCAAAAAGTATATAATTTAAAAAAAAAAGACAGAAC
ATGGATACNGAAAAAAACTTCATTTCTTAGGGAAGAAGTTACAAAATTTA
TCACTTC

Query= MSMg01no493_f10.g1 MSMg01no493_f10.g1 CHROMAT_FILE:
MSMg01no493_f10.g1 PHD_FILE: MSMg01no493_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:50 2005
         (517 letters)



>mm_chr17_59956921_59957837
          Length = 917

 Score =  969 bits (501), Expect = 0.0
 Identities = 513/517 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataatttccttcattctatgaatcttgtttttcttcacatgaccataaataagaaatat 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 717 tataatttccttcattctatgaatcttgtttttcttctcatgaccataaataagaaatat 658

                                                                       
Query: 61  attacaactaatattagaaaataaagatcagtagctatatggcttaattcaaaacctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attacaactaatattagaaaataaagatcagtagctatatggcttaattcaaaacctcct 598

                                                                       
Query: 121 catcacttgaaaaagtgaactaatattcagtatcttacagaagaaataacacctgtgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 catcacttgaaaaagtgaactaatattcagtatcttacagaagaaataacacctgtgtga 538

                                                                       
Query: 181 tctgtctaacatttgcacagcctagaatttcacatcgtactcatgaacatttgaaaatct 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 537 tctgtctaacatttgcacagcctagaatttcacattgtactcatgaacatttgaaaatct 478

                                                                       
Query: 241 tagtaacatactccatattctttattggcaagaacacattgtaaatatttgtaagtggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tagtaacatactccatattctttattggcaagaacacattgtaaatatttgtaagtggat 418

                                                                       
Query: 301 agcattgttatttttattatcagcatgaatccaagttaaaattttattttcagcaaccac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agcattgttatttttattatcagcatgaatccaagttaaaattttattttcagcaaccac 358

                                                                       
Query: 361 actgatttggattactgacatttttaaattgataatttatattgagaaatcttatggata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 actgatttggattactgacatttttaaattgataatttatattgagaaatcttatggata 298

                                                                       
Query: 421 atattttgatatgttttatgctagatgaaaacaacatcataagaaatcatacttttgtgg 480
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 297 atattttgatatgttttatgctagatgaaaacaacgtcataagaaatcatacttgtgtgg 238

                                                
Query: 481 catggctaacatagtattacagaataatttgtaggtg 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 237 catggctaacatagtattacagaataatttgtaggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)